Evidence map›Paper›PMID 38956452›Full record

ArticleBMC microbiology2024

Alterations of the bile microbiome is associated with progression-free survival in pancreatic ductal adenocarcinoma patients.

Hang Jiang, Yitong Tian, Linwei Xu, Xing Chen, Yurun Huang, Jia Wu, Tingzhang Wang, Tingting Liu, Xitian Wu, Chao Ye and 4 more

Abstract read
In one paragraph

Article in BMC microbiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Hang Jiang *Zhejiang Cancer Hospital, Hangzhou, Zhejiang, 310022, China.
Yitong Tian *Zhejiang University, Hangzhou, Zhejiang Province, 310058, China.
Linwei Xu *Zhejiang Cancer Hospital, Hangzhou, Zhejiang, 310022, China.
Xing ChenZhejiang Cancer Hospital, Hangzhou, Zhejiang, 310022, China.
Yurun HuangZhejiang Cancer Hospital, Hangzhou, Zhejiang, 310022, China.
Jia WuZhejiang Cancer Hospital, Hangzhou, Zhejiang, 310022, China.
Tingzhang WangKey Laboratory of Microbial Technology and Bioinformatics of Zhejiang Province, Hangzhou, China.
Tingting LiuKey Laboratory of Microbial Technology and Bioinformatics of Zhejiang Province, Hangzhou, China.
Xitian WuZhejiang Cancer Hospital, Hangzhou, Zhejiang, 310022, China.
Chao YeZhejiang Cancer Hospital, Hangzhou, Zhejiang, 310022, China.
Hao WuZhejiang Cancer Hospital, Hangzhou, Zhejiang, 310022, China.
Wenkai YeZhejiang Cancer Hospital, Hangzhou, Zhejiang, 310022, China.
Luo FangZhejiang Cancer Hospital, Hangzhou, Zhejiang, 310022, China. fangluo@zjcc.org.cn.
Yuhua ZhangZhejiang Cancer Hospital, Hangzhou, Zhejiang, 310022, China. drzhangyuhua@126.com.

Funding

the Natural Science Foundation of China 82274020the Science and Technology Plan Project of Zhejiang Province 2021C03106
6 · The paper itself

Abstract

backgroundPatients with pancreatic ductal adenocarcinoma (PDAC) display an altered oral, gastrointestinal, and intra-pancreatic microbiome compared to healthy individuals. However, knowledge regarding the bile microbiome and its potential impact on progression-free survival in PDACs remains limited.

methodsPatients with PDAC (n = 45), including 20 matched pairs before and after surgery, and benign controls (n = 16) were included prospectively. The characteristics of the microbiomes of the total 81 bile were revealed by 16  S-rRNA gene sequencing. PDAC patients were divided into distinct groups based on tumor marker levels, disease staging, before and after surgery, as well as progression free survival (PFS) for further analysis. Disease diagnostic model was formulated utilizing the random forest algorithm.

resultsPDAC patients harbor a unique and diverse bile microbiome (PCoA, weighted Unifrac, p = 0.038), and the increasing microbial diversity is correlated with dysbiosis according to key microbes and microbial functions. Aliihoeflea emerged as the genus displaying the most significant alteration among two groups (p < 0.01). Significant differences were found in beta diversity of the bile microbiome between long-term PFS and short-term PFS groups (PCoA, weighted Unifrac, p = 0.005). Bacillota and Actinomycetota were identified as altered phylum between two groups associated with progression-free survival in all PDAC patients. Additionally, we identified three biomarkers as the most suitable set for the random forest model, which indicated a significantly elevated likelihood of disease occurrence in the PDAC group (p < 0.0001). The area under the receiver operating characteristic (ROC) curve reached 80.8% with a 95% confidence interval ranging from 55.0 to 100%. Due to the scarcity of bile samples, we were unable to conduct further external verification.

conclusionPDAC is characterized by an altered microbiome of bile ducts. Biliary dysbiosis is linked with progression-free survival in all PDACs. This study revealed the alteration of the bile microbiome in PDACs and successfully developed a diagnostic model for PDAC.

Indexed as

BileCarcinoma, Pancreatic DuctalMicrobiotaPancreatic NeoplasmsAgedBacteriaDysbiosisFemaleHumansMaleMiddle AgedProgression-Free SurvivalProspective StudiesRNA, Ribosomal, 16SRNA, Ribosomal, 16SBile microbiomePancreatic ductal adenocarcinomaProgression free survival

Identifiers

PMID38956452
PMCPMC11218221

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.