Evidence map›Paper›PMID 38956258›Full record

ArticleScientific reports2024

Socioeconomic disparities and the genomic landscape of gastric cancer.

Daniel Zanabria, Marco Galvez-Nino, Jhajaira M Araujo, Alejandro Alfaro, Williams Fajardo, Luis Saravia, Lidia Quispe, Gina Velazque, Junior Carbajal, María J López and 9 more

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
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  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Daniel ZanabriaDepartamento de Patología, Oncosalud-Auna, Lima, Peru.
Marco Galvez-NinoDepartamento de Oncología Médica, Oncosalud-Auna, Lima, Peru.
Jhajaira M AraujoCentro de Investigación Básica y Traslacional, Auna Ideas, Av. Guardia Civil 571, San Borja, 15036, Lima, Peru.
Alejandro AlfaroServicio de Anatomía Patológica, Hospital Nacional Dos de Mayo, Lima, Peru.
Williams FajardoEscuela Profesional de Medicina Humana, Universidad Privada San Juan Bautista, Lima, Peru.
Luis SaraviaServicio de Emergencia, Hospital Regional de Ica, Ica, Peru.
Lidia QuispeDepartamento de Patología, Hospital Regional de Ica, Ica, Peru.
Gina VelazqueServicio de Gastroenterología, Hospital Regional de Ica, Ica, Peru.
Junior CarbajalFacultad de Ciencias Biológicas, Universidad Nacional San Luis Gonzaga, Ica, Peru.
María J LópezFacultad de Ciencias Biológicas, Universidad Nacional San Luis Gonzaga, Ica, Peru.
Sergio JimenezFacultad de Ciencias Naturales y Matematicas, Universidad Nacional Federico Villarreal, Lima, Peru.
Paola MontenegroDepartamento de Oncología Médica, Oncosalud-Auna, Lima, Peru.
Alejandra ZevallosEscuela Profesional de Medicina Humana, Universidad Privada San Juan Bautista, Lima, Peru.
Maria de Los Angeles ClavoFacultad de Medicina Humana, Universidad Nacional San Luis Gonzaga, Ica, Peru.
Paula Medina-PérezCentro de Investigación Básica y Traslacional, Auna Ideas, Av. Guardia Civil 571, San Borja, 15036, Lima, Peru.
Melanie CornejoCentro de Investigación Básica y Traslacional, Auna Ideas, Av. Guardia Civil 571, San Borja, 15036, Lima, Peru.
María RequenaCentro de Investigación Básica y Traslacional, Auna Ideas, Av. Guardia Civil 571, San Borja, 15036, Lima, Peru.
Alfredo AguilarCentro de Investigación Básica y Traslacional, Auna Ideas, Av. Guardia Civil 571, San Borja, 15036, Lima, Peru.
Joseph A PintoCentro de Investigación Básica y Traslacional, Auna Ideas, Av. Guardia Civil 571, San Borja, 15036, Lima, Peru. joseph.pinto@auna-ideas.org.

Funding

Roche Peru GSD039-20
6 · The paper itself

Abstract

The genomic characteristics of Peruvian patients with gastric adenocarcinoma from diverse socioeconomic backgrounds were examined in consideration of the possibility that patients from different socioeconomic backgrounds may be exposed to different risk factors. We conducted a prospective pilot study in two Peruvian cities (Lima and Ica). This study enrolled 15 patients from low socioeconomic status (LSES) and 15 patients from medium/high socioeconomic status (MHSES). The genomic profiling of gastric adenocarcinoma samples was done through the FoundationOne CDx platform. We compared the genomic characteristics and the need for targeted therapy and immunotherapy between LSES and MHSES. The genes with higher rates of alterations were TP53 (73.3% vs. 50.0%, P = 0.2635); CDH1 (26.7% vs. 28.6%, P = 1); CDKN2A (20.0% vs. 28.6%, P = 1); KRAS (33.3% vs. 7.1%, P = 0.1686); ARID1A (20.0% vs. 14.3%, P = 1); MLL2 (13.3% vs. 21.4%, P = 1) and SOX9 (33.3% vs. 0.0%, P = 0.0421) in LSES versus HMSES, respectively. There was no significant difference in tumor mutational burden (P = 0.377) or microsatellite status (P = 1). The LSES group had a higher need for targeted therapy or immunotherapy according to gene involvement and alterations. A significant genomic difference exists among patients with gastric adenocarcinoma of different socioeconomic status, which may result in a different need for targeted therapy and immunotherapy.

Indexed as

Stomach NeoplasmsAdenocarcinomaAdultAgedFemaleGenomicsHumansMaleMiddle AgedMutationPeruPilot ProjectsProspective StudiesSocial ClassSocioeconomic Disparities in HealthSocioeconomic FactorsGastric cancerImmunotherapyNext-generation sequencingSocioeconomic statusTargeted therapy

Identifiers

PMID38956258
PMCPMC11219810

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.