Evidence map›Paper›PMID 38955977›Full record

ArticleMolecular diversity2025

Targeting AFP-RARβ complex formation: a potential strategy for treating AFP-positive hepatocellular carcinoma.

Bhavya Banjan, Riya Vishwakarma, Krishnapriya Ramakrishnan, Radul R Dev, Haritha Kalath, Pankaj Kumar, Sowmya Soman, Rajesh Raju, Amjesh Revikumar, Niyas Rehman and 1 more

Abstract read
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Article in Molecular diversity, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Bhavya BanjanCentre for Integrative Omics Data Science, Yenepoya (Deemed to Be University), Mangalore, 575018, India.
Riya VishwakarmaCentre for Integrative Omics Data Science, Yenepoya (Deemed to Be University), Mangalore, 575018, India.
Krishnapriya RamakrishnanCentre for Integrative Omics Data Science, Yenepoya (Deemed to Be University), Mangalore, 575018, India.
Radul R DevCentre for Integrative Omics Data Science, Yenepoya (Deemed to Be University), Mangalore, 575018, India.
Haritha KalathCentre for Integrative Omics Data Science, Yenepoya (Deemed to Be University), Mangalore, 575018, India.
Pankaj KumarNitte (Deemed to Be University), Department of Pharmaceutical Chemistry, NGSMPS, NGSM Institute of Pharmaceutical Sciences, Mangalore, 575018, Karnataka, India.
Sowmya SomanCentre for Integrative Omics Data Science, Yenepoya (Deemed to Be University), Mangalore, 575018, India.
Rajesh RajuCentre for Integrative Omics Data Science, Yenepoya (Deemed to Be University), Mangalore, 575018, India.
Amjesh RevikumarCentre for Integrative Omics Data Science, Yenepoya (Deemed to Be University), Mangalore, 575018, India.
Niyas RehmanCentre for Integrative Omics Data Science, Yenepoya (Deemed to Be University), Mangalore, 575018, India. niyas.rehman@yenepoya.edu.in.
Chandran S AbhinandCentre for Systems Biology and Molecular Medicine (CSBMM), Yenepoya Research Centre, Yenepoya (Deemed to Be University), Deralakatte, Mangalore, 575018, Karnataka, India. abhinand.rohini@gmail.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Alpha-fetoprotein (AFP) is a glycoprotein primarily expressed during embryogenesis, with declining levels postnatally. Elevated AFP levels correlate with pathological conditions such as liver fibrosis, cirrhosis, and hepatocellular carcinoma (HCC). Recent investigations underscore AFP's intracellular role in HCC progression, wherein it forms complexes with proteins like Phosphatase and tensin homolog (PTEN), Caspase 3 (CASP3), and Retinoic acid receptors and Retinoid X receptors (RAR/RXR). RAR and RXR regulate gene expression linked to cell death and tumorigenesis in normal physiology. AFP impedes RAR/RXR dimerization, nuclear translocation, and function, promoting gene expression favoring cancer progression in HCC that provoked us to target AFP as a drug candidate. Despite extensive studies, inhibitors targeting AFP to disrupt complex formation and activities remain scarce. In this study, employing protein-protein docking, amino acid residues involved in AFP-RARβ interaction were identified, guiding the definition of AFP's active site for potential inhibitor screening. Currently, kinase inhibitors play a significant role in cancer treatment and, the present study explores the potential of repurposing FDA-approved protein kinase inhibitors to target AFP. Molecular docking with kinase inhibitors revealed Lapatinib as a candidate drug of the AFP-RARβ complex. Molecular dynamics simulations and binding energy calculations, employing Mechanic/Poisson-Boltzmann Surface Area (MM-PBSA), confirmed Lapatinib's stability with AFP. The study suggests Lapatinib's potential in disrupting the AFP-RARβ complex, providing a promising avenue for treating molecularly stratified AFP-positive HCC or its early stages.

Indexed as

alpha-FetoproteinsCarcinoma, HepatocellularLiver NeoplasmsReceptors, Retinoic AcidAntineoplastic AgentsHumansMolecular Docking SimulationMolecular Dynamics SimulationProtein BindingProtein Kinase Inhibitorsalpha-FetoproteinsAntineoplastic AgentsProtein Kinase InhibitorsReceptors, Retinoic AcidAFPHCCLapatinibMolecular dockingMolecular dynamic simulationsRAR/RXR

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.