Evidence map›Paper›PMID 38954047›Full record

ArticleArchives of microbiology2024

Analysis of the cell wall binding domain in bacteriocin-like lysin LysL from Lactococcus lactis LAC460.

Samira Mokhtari, Yanru Li, Per E J Saris, Timo M Takala

Abstract read
In one paragraph

Article in Archives of microbiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Samira MokhtariDepartment of Microbiology, University of Helsinki, P.O. Box 56, 00014, Helsinki, Finland. samira.mokhtari@helsinki.fi.ORCID http://orcid.org/0000-0003-2068-2507
Yanru LiDepartment of Microbiology, University of Helsinki, P.O. Box 56, 00014, Helsinki, Finland.
Per E J SarisDepartment of Microbiology, University of Helsinki, P.O. Box 56, 00014, Helsinki, Finland.ORCID http://orcid.org/0000-0001-7330-4177
Timo M TakalaDepartment of Microbiology, University of Helsinki, P.O. Box 56, 00014, Helsinki, Finland.ORCID http://orcid.org/0000-0001-6178-8346

Funding

Niemi-säätiö 20210081The Finnish Cultural Foundation 27.02.2022
6 · The paper itself

Abstract

Wild-type Lactococcus lactis strain LAC460 secretes prophage-encoded bacteriocin-like lysin LysL, which kills some Lactococcus strains, but has no lytic effect on the producer. LysL carries two N-terminal enzymatic active domains (EAD), and an unknown C-terminus without homology to known domains. This study aimed to determine whether the C-terminus of LysL carries a cell wall binding domain (CBD) for target specificity of LysL. The C-terminal putative CBD region of LysL was fused with His-tagged green fluorescent protein (HGFPuv). The HGFPuv_CBDlysL gene fusion was ligated into the pASG-IBA4 vector, and introduced into Escherichia coli. The fusion protein was produced and purified with affinity chromatography. To analyse the binding of HGFPuv_CBDLysL to Lactococcus cells, the protein was mixed with LysL-sensitive and LysL-resistant strains, including the LysL-producer LAC460, and the fluorescence of the cells was analysed. As seen in fluorescence microscope, HGFPuv_CBDLysL decorated the cell surface of LysL-sensitive L. cremoris MG1614 with green fluorescence, whereas the resistant L. lactis strains LM0230 and LAC460 remained unfluorescent. The fluorescence plate reader confirmed the microscopy results detecting fluorescence only from four tested LysL-sensitive strains but not from 11 tested LysL-resistant strains. Specific binding of HGFPuv_CBDLysL onto the LysL-sensitive cells but not onto the LysL-resistant strains indicates that the C-terminus of LysL contains specific CBD. In conclusion, this report presents experimental evidence of the presence of a CBD in a lactococcal phage lysin. Moreover, the inability of HGFPuv_CBDLysL to bind to the LysL producer LAC460 may partly explain the host's resistance to its own prophage lysin.

Indexed as

BacteriocinsCell WallLactococcus lactisEscherichia coliGreen Fluorescent ProteinsProtein BindingProtein DomainsRecombinant Fusion ProteinsBacteriocinsGreen Fluorescent ProteinsRecombinant Fusion ProteinsCell wall binding domainGreen fluorescent proteinLactococcus lactisProphage lysin

Identifiers

PMID38954047
PMCPMC11219366

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.