Evidence map›Paper›PMID 38953530›Full record

ArticleAnalytical chemistry2024

Highly Sensitive Spatial Glycomics at Near-Cellular Resolution by On-Slide Derivatization and Mass Spectrometry Imaging.

Cécile Cumin, Lindsay Gee, Thomas Litfin, Ropafadzo Muchabaiwa, Gael Martin, Oren Cooper, Viola Heinzelmann-Schwarz, Tobias Lange, Mark von Itzstein, Francis Jacob and 1 more

Abstract read
In one paragraph

Article in Analytical chemistry, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Cécile CuminInstitute for Glycomics, Griffith University, Gold Coast, Queensland 4222, Australia.
Lindsay GeeInstitute for Glycomics, Griffith University, Gold Coast, Queensland 4222, Australia.ORCID 0000-0003-4164-6417
Thomas LitfinInstitute for Glycomics, Griffith University, Gold Coast, Queensland 4222, Australia.
Ropafadzo MuchabaiwaInstitute for Glycomics, Griffith University, Gold Coast, Queensland 4222, Australia.
Gael MartinInstitute for Glycomics, Griffith University, Gold Coast, Queensland 4222, Australia.
Oren CooperInstitute for Glycomics, Griffith University, Gold Coast, Queensland 4222, Australia.
Viola Heinzelmann-SchwarzOvarian Cancer Research, University Hospital Basel, University of Basel, Basel 4001, Switzerland.
Tobias LangeInstitute of Anatomy and Experimental Morphology, University Cancer Center Hamburg (UCCH), University Medical Center Hamburg-Eppendorf, Hamburg 20251, Germany.
Mark von ItzsteinInstitute for Glycomics, Griffith University, Gold Coast, Queensland 4222, Australia.ORCID 0000-0001-6302-7524
Francis JacobOvarian Cancer Research, University Hospital Basel, University of Basel, Basel 4001, Switzerland.
Arun Everest-DassInstitute for Glycomics, Griffith University, Gold Coast, Queensland 4222, Australia.ORCID 0000-0002-3795-0291

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Glycans on proteins and lipids play important roles in maturation and cellular interactions, contributing to a variety of biological processes. Aberrant glycosylation has been associated with various human diseases including cancer; however, elucidating the distribution and heterogeneity of glycans in complex tissue samples remains a major challenge. Matrix-assisted laser desorption/ionization (MALDI) mass spectrometry imaging (MSI) is routinely used to analyze the spatial distribution of a variety of molecules including N-glycans directly from tissue surfaces. Sialic acids are nine carbon acidic sugars that often exist as the terminal sugars of glycans and are inherently difficult to analyze using MALDI-MSI due to their instability prone to in- and postsource decay. Here, we report on a rapid and robust method for stabilizing sialic acid on N-glycans in FFPE tissue sections. The established method derivatizes and identifies the spatial distribution of α2,3- and α2,6-linked sialic acids through complete methylamidation using methylamine and PyAOP ((7-azabenzotriazol-1-yloxy)tripyrrolidinophosphonium hexafluorophosphate). Our in situ approach increases the glycans detected and enhances the coverage of sialylated species. Using this streamlined, sensitive, and robust workflow, we rapidly characterize and spatially localize N-glycans in human tumor tissue sections. Additionally, we demonstrate this method's applicability in imaging mammalian cell suspensions directly on slides, achieving cellular resolution with minimal sample processing and cell numbers. This workflow reveals the cellular locations of distinct N-glycan species, shedding light on the biological and clinical significance of these biomolecules in human diseases.

Indexed as

GlycomicsPolysaccharidesSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationHumansPolysaccharides

Identifiers

PMID38953530
PMCPMC11256013

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.