Evidence map›Paper›PMID 38953491›Full record

ArticleAnalytical chemistry2024

MOTAI: A Novel Method for the Study of O-GalNAcylation and Complex O-Glycosylation in Cancer.

Shuang Yue, Xiaotong Wang, Lei Wang, Jiajia Li, Yufeng Zhou, Yan Chen, Zeyang Zhou, Xiaodong Yang, Xiaofeng Shi, Song Gao and 4 more

Abstract read
In one paragraph

Article in Analytical chemistry, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Shuang YueCenter for Clinical Mass Spectrometry, College of Pharmaceutical Sciences, Soochow University, Jiangsu, 215123, China.
Xiaotong WangDepartment of Hepatology and Gastroenterology, The Affiliated Infectious Hospital of Soochow University, Suzhou 215004, China.
Lei WangProtein Metrics LLC, Room 201-01, Building A, Novasiot, 58 Xiangke Road, Zhangjiang, Shanghai 201203, China.
Jiajia LiCenter for Clinical Mass Spectrometry, College of Pharmaceutical Sciences, Soochow University, Jiangsu, 215123, China.
Yufeng ZhouCenter for Clinical Mass Spectrometry, College of Pharmaceutical Sciences, Soochow University, Jiangsu, 215123, China.
Yan ChenCenter for Clinical Mass Spectrometry, College of Pharmaceutical Sciences, Soochow University, Jiangsu, 215123, China.
Zeyang ZhouDepartment of General Surgery, The Second Affiliated Hospital of Soochow University, Suzhou 215004, China.
Xiaodong YangDepartment of General Surgery, The Second Affiliated Hospital of Soochow University, Suzhou 215004, China.
Xiaofeng ShiNew England Biolabs, Inc., 240 County Road, Ipswich, Massachusetts 01938, United States.
Song GaoJiangsu Key Laboratory of Marine Biological Resources and Environment, Jiangsu Ocean University, Lianyungang 222005, China.ORCID 0000-0002-0151-6493
Zhongmin WenHealth Management Center, The Second Affiliated Hospital of Soochow University, Suzhou, Jiangsu 215004, China.
Xiaojun ZhuHealth Management Center, The Second Affiliated Hospital of Soochow University, Suzhou, Jiangsu 215004, China.
Yan WangMass Spectrometry Facility, National Institute of Dental and Craniofacial Research, National Institutes of Health, Bethesda, Maryland 20892, United States.
Shuang YangCenter for Clinical Mass Spectrometry, College of Pharmaceutical Sciences, Soochow University, Jiangsu, 215123, China.ORCID 0000-0001-7958-0594

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Tn antigen, an immature truncated O-glycosylation, is a promising biomarker for cancer detection and diagnosis. However, reliable methods for analyzing O-GalNAcylation and complex O-glycosylation are lacking. Here, we develop a novel method, MOTAI, for the sequential analysis of O-glycosylation using different O-glycoproteases. MOTAI conjugates glycopeptides on a solid support and releases different types of O-glycosylation through sequential enzymatic digestion by O-glycoproteases, including OpeRATOR and IMPa. Because OpeRATOR has less activity on O-GalNAcylation, MOTAI enriches O-GalNAcylation for subsequent analysis. We demonstrate the effectiveness of MOTAI by analyzing fetuin O-glycosylation and Jurkat cell lines. We then apply MOTAI to analyze colorectal cancer and benign colorectal polyps. We identify 32 Tn/sTn-glycoproteins and 43 T/sT-glycoproteins that are significantly increased in tumor tissues. Gene Ontology analysis reveals that most of these proteins are ECM proteins involved in the adhesion process of the intercellular matrix. Additionally, the protein disulfide isomerase

Indexed as

Antigens, Tumor-Associated, CarbohydrateColorectal NeoplasmsGlycosylationHumansJurkat CellsAntigens, Tumor-Associated, CarbohydrateTn antigen

Identifiers

PMID38953491
PMCPMC11257061

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.