Evidence map›Paper›PMID 38948540›Full record

ArticleEvolutionary applications2024

Integrating very high resolution environmental proxies in genotype-environment association studies.

Annie S Guillaume, Kevin Leempoel, Aude Rogivue, Felix Gugerli, Christian Parisod, Stéphane Joost

Abstract read
In one paragraph

Article in Evolutionary applications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Annie S GuillaumeGeospatial Molecular Epidemiology Group (GEOME), Laboratory for Biological Geochemistry (LGB), Ecole Polytechnique Fédérale de Lausanne (EPFL) Lausanne Switzerland.ORCID https://orcid.org/0000-0002-2188-2861
Kevin LeempoelGeospatial Molecular Epidemiology Group (GEOME), Laboratory for Biological Geochemistry (LGB), Ecole Polytechnique Fédérale de Lausanne (EPFL) Lausanne Switzerland.ORCID https://orcid.org/0000-0001-7335-7930
Aude RogivueWSL Swiss Federal Research Institute Birmensdorf Switzerland.ORCID https://orcid.org/0000-0002-6864-0587
Felix GugerliWSL Swiss Federal Research Institute Birmensdorf Switzerland.ORCID https://orcid.org/0000-0003-3878-1845
Christian ParisodDepartment of Biology University of Fribourg Fribourg Switzerland.ORCID https://orcid.org/0000-0001-8798-0897
Stéphane JoostGeospatial Molecular Epidemiology Group (GEOME), Laboratory for Biological Geochemistry (LGB), Ecole Polytechnique Fédérale de Lausanne (EPFL) Lausanne Switzerland.ORCID https://orcid.org/0000-0002-1184-7501

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Landscape genomic analyses associating genetic variation with environmental variables are powerful tools for studying molecular signatures of species' local adaptation and for detecting candidate genes under selection. The development of landscape genomics over the past decade has been spurred by improvements in resolutions of genomic and environmental datasets, allegedly increasing the power to identify putative genes underlying local adaptation in non-model organisms. Although these associations have been successfully applied to numerous species across a diverse array of taxa, the spatial scale of environmental predictor variables has been largely overlooked, potentially limiting conclusions to be reached with these methods. To address this knowledge gap, we systematically evaluated performances of genotype-environment association (GEA) models using predictor variables at multiple spatial resolutions. Specifically, we used multivariate redundancy analyses to associate whole-genome sequence data from the plant

Indexed as

digital elevation modelslandscape genomicslocal adaptationmultiscale analysisspatial scaletopographic variables

Identifiers

PMID38948540
PMCPMC11212006

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.