Evidence map›Paper›PMID 38947502›Full record

ArticleiScience2024

Human gut Actinobacteria boost drug absorption by secreting P-glycoprotein ATPase inhibitors.

Than S Kyaw, Chen Zhang, Moriah Sandy, Kai Trepka, Shenwei Zhang, Luis A Ramirez Hernandez, Lorenzo Ramirez, Janice J N Goh, Kristie Yu, Vincent Dimassa and 5 more

Abstract read
In one paragraph

Article in iScience, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Observational
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Review
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  10. Review
  11. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Than S KyawDepartment of Microbiology and Immunology, University of California San Francisco, San Francisco, CA 94143, USA.
Chen ZhangDepartment of Microbiology and Immunology, University of California San Francisco, San Francisco, CA 94143, USA.
Moriah SandyDepartment of Microbiology and Immunology, University of California San Francisco, San Francisco, CA 94143, USA.
Kai TrepkaDepartment of Microbiology and Immunology, University of California San Francisco, San Francisco, CA 94143, USA.
Shenwei ZhangDepartment of Microbiology and Immunology, University of California San Francisco, San Francisco, CA 94143, USA.
Luis A Ramirez HernandezDepartment of Microbiology and Immunology, University of California San Francisco, San Francisco, CA 94143, USA.
Lorenzo RamirezDepartment of Microbiology and Immunology, University of California San Francisco, San Francisco, CA 94143, USA.
Janice J N GohDepartment of Microbiology and Immunology, University of California San Francisco, San Francisco, CA 94143, USA.
Kristie YuDepartment of Microbiology and Immunology, University of California San Francisco, San Francisco, CA 94143, USA.
Vincent DimassaDepartment of Microbiology and Immunology, University of California San Francisco, San Francisco, CA 94143, USA.
Elizabeth N BessDepartment of Microbiology and Immunology, University of California San Francisco, San Francisco, CA 94143, USA.
Jacob G BrockertQuantitative Metabolite Analysis Center, Benioff Center for Microbiome Medicine, University of California San Francisco, San Francisco, CA 94143, USA.
Darren S DumlaoQuantitative Metabolite Analysis Center, Benioff Center for Microbiome Medicine, University of California San Francisco, San Francisco, CA 94143, USA.
Jordan E BisanzDepartment of Microbiology and Immunology, University of California San Francisco, San Francisco, CA 94143, USA.
Peter J TurnbaughDepartment of Microbiology and Immunology, University of California San Francisco, San Francisco, CA 94143, USA.

Funding

Predicting and preventing drug metabolism by the human gut microbiomeR01HL122593 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Peter James Turnbaugh · 2016 to 2026
$5.7M
Employing the gut microbiome to accelerate effective initiation of rheumatoid arthritis therapyR01AR074500 · NIAMS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI Renuka Rajendra Nayak, Jose U. Scher · 2019 to 2026
$4.1M
Host-microbiome interactions shape the metabolic effects of ketogenic dietsR01DK114034 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI TURNBAUGH, PETER JAMES · 2020 to 2024
$2.5M
Establishing the feasibility of editing the human gut microbiomeR01AT011117 · NCCIH · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI TURNBAUGH, PETER JAMES · 2020 to 2023
$1.6M
(PQ10) Harnessing the human gut microbiome to predict chemotherapy outcomesR21CA227232 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI ATREYA, CHLOE E., TURNBAUGH, PETER JAMES · 2018 to 2019
$378k
Impact of the microbiome on chemotherapeutic outcomesF30CA257378 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KYAW, THAN SOE · 2021 to 2024
$190k
NCCIH NIH HHS R01 AT011117NCI NIH HHS F30 CA257378NCI NIH HHS R21 CA227232NHLBI NIH HHS R01 HL122593NIAMS NIH HHS R01 AR074500NIDDK NIH HHS R01 DK114034
6 · The paper itself

Abstract

Drug efflux transporters are a major determinant of drug efficacy and toxicity. A canonical example is P-glycoprotein (P-gp), an efflux transporter that controls the intestinal absorption of diverse compounds. Despite a rich literature on the dietary and pharmaceutical compounds that impact P-gp activity, its sensitivity to gut microbial metabolites remains an open question. Surprisingly, we found that the cardiac drug-metabolizing gut Actinobacterium

Indexed as

Biological sciencesMicrobiologyMicrobiomeNatural sciencesPharmacology

Identifiers

PMID38947502
PMCPMC11214321

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.