Evidence map›Paper›PMID 38946675›Full record

ArticleAlzheimer's & dementia : the journal of the Alzheimer's Association2024

Admixture mapping of cognitive function in diverse Hispanic and Latino adults: Results from the Hispanic Community Health Study/Study of Latinos.

Rui Xia, Xueqiu Jian, Amanda L Rodrigue, Jan Bressler, Eric Boerwinkle, Biqi Cui, Martha L Daviglus, Charles DeCarli, Linda C Gallo, David C Glahn and 11 more

Abstract read
In one paragraph

Article in Alzheimer's & dementia : the journal of the Alzheimer's Association, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors.

Rui XiaInstitute of Molecular Medicine, McGovern Medical School, The University of Texas Health Science Center at Houston, Houston, Texas, USA.
Xueqiu JianGlenn Biggs Institute for Alzheimer's and Neurodegenerative Diseases, The University of Texas Health Science Center at San Antonio, San Antonio, Texas, USA.
Amanda L RodrigueDepartment of Psychiatry, Harvard Medical School, Boston Children's Hospital, Boston, Massachusetts, USA.
Jan BresslerHuman Genetics Center, School of Public Health, The University of Texas Health Science Center at Houston, Houston, Texas, USA.
Eric BoerwinkleHuman Genetics Center, School of Public Health, The University of Texas Health Science Center at Houston, Houston, Texas, USA.
Biqi CuiGlenn Biggs Institute for Alzheimer's and Neurodegenerative Diseases, The University of Texas Health Science Center at San Antonio, San Antonio, Texas, USA.
Martha L DaviglusInstitute for Minority Health Research, University of Illinois Chicago, Chicago, Illinois, USA.
Charles DeCarliDepartment of Neurology, University of California Davis, Sacramento, California, USA.
Linda C GalloDepartment of Psychology, San Diego State University, San Diego, California, USA.
David C GlahnDepartment of Psychiatry, Harvard Medical School, Boston Children's Hospital, Boston, Massachusetts, USA.
Emma E M KnowlesDepartment of Psychiatry, Harvard Medical School, Boston Children's Hospital, Boston, Massachusetts, USA.
Jee-Young MoonDepartment of Epidemiology & Population Health, Albert Einstein College of Medicine, Bronx, New York, USA.
Thomas H MosleyThe MIND Center, University of Mississippi Medical Center, Jackson, Mississippi, USA.
Claudia L SatizabalGlenn Biggs Institute for Alzheimer's and Neurodegenerative Diseases, The University of Texas Health Science Center at San Antonio, San Antonio, Texas, USA.
Tamar SoferDepartment of Medicine, Harvard Medical School, Brigham and Women's Hospital, Boston, Massachusetts, USA.
Wassim TarrafInstitute of Gerontology & Department of Healthcare Sciences, Wayne State University, Detroit, Michigan, USA.
Fernando TestaiDepartment of Neurology and Rehabilitation, University of Illinois at Chicago, Chicago, Illinois, USA.
John BlangeroDepartment of Human Genetics, South Texas Diabetes and Obesity Institute, University of Texas Rio Grande Valley, Brownsville, Texas, USA.
Sudha SeshadriGlenn Biggs Institute for Alzheimer's and Neurodegenerative Diseases, The University of Texas Health Science Center at San Antonio, San Antonio, Texas, USA.
Hector M GonzálezDepartment of Neurosciences, University of California San Diego, La Jolla, California, USA.
Myriam FornageInstitute of Molecular Medicine, McGovern Medical School, The University of Texas Health Science Center at Houston, Houston, Texas, USA.

Funding

UCSD Shiley-Marcos Alzheimer's Disease Research Center P30P30AG062429 · NIA · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Steven Dyal Edland · 2019 to 2026
$34.9M
South Texas Alzheimer's Disease Research CenterP30AG066546 · NIA · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI Sudha Seshadri · 2021 to 2026
$24.0M
Study of Latinos-Investigation of Neurocognitive Aging-Alzheimer's diseaseR01AG075758 · NIA · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Charles DeCarli, Hector M Gonzalez · 2022 to 2026
$21.7M
Genetic Analysis and Manipulation Core (GAEC)P50HD105351 · NICHD · BOSTON CHILDREN'S HOSPITAL · PI SCOTT Loren POMEROY, MUSTAFA SAHIN · 2021 to 2026
$9.4M
SOLAR-Eclipse Computational Tools for Imaging GeneticsR01EB015611 · NIBIB · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI KOCHUNOV, PETER V. · 2012 to 2024
$5.0M
ADSP Follow-up in Multi-Ethnic Cohorts via Endophenotypes, Omics & Model SystemsU01AG052409 · NIA · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI FORNAGE, MYRIAM, SESHADRI, SUDHA · 2016 to 2020
$1.6M
Genetic risk for trajectories of cognitive decline and progression to dementia among Mexican Americans and non-Hispanic whitesR21AG075791 · NIA · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI JIAN, XUEQIU · 2022 to 2022
$440k
Albert Einstein College of Medicine HHSN268201300002IAlbert Einstein College of Medicine N01-HC-65235HCHS/SOL R01AG075758HCHS/SOL U01AG052409NHGRI NIH HHS HHSN268201300003CNHLBI NIH HHS HHSN268201300001CNHLBI NIH HHS HHSN268201300003INHLBI NIH HHS HHSN268201300004CNHLBI NIH HHS HHSN268201300005CNIA NIH HHS P30 AG062429NIA NIH HHS P30 AG066546NIA NIH HHS R01 AG075758NIA NIH HHS R21 AG075791NIA NIH HHS U01 AG052409NIBIB NIH HHS R01 EB015611NICHD NIH HHS P50 HD105351NIDCD NIH HHSNIDCR NIH HHSNIDDK NIH HHSNIH Institution-Office of Dietary SupplementsNIMHD NIH HHSNINDS NIH HHSSan Diego State University HHSN268201300005ISan Diego State University N01-HC-65237University of Illinois at Chicago N01-HC-65236University of Miami HHSN268201300004IUniversity of Miami N01-HC-65234University of North Carolina HHSN268201300001IUniversity of North Carolina N01-HC-65233
6 · The paper itself

Abstract

introductionWe conducted admixture mapping and fine-mapping analyses to identify ancestry-of-origin loci influencing cognitive abilities.

methodsWe estimated the association of local ancestry intervals across the genome with five neurocognitive measures in 7140 diverse Hispanic and Latino adults (mean age 55 years). We prioritized genetic variants in associated loci and tested them for replication in four independent cohorts.

resultsWe identified nine local ancestry-associated regions for the five neurocognitive measures. There was strong biological support for the observed associations to cognitive function at all loci and there was statistical evidence of independent replication at 4q12, 9p22.1, and 13q12.13. DISCUSSION: Our study identified multiple novel loci harboring genes implicated in cognitive functioning and dementia, and uncovered ancestry-relevant genetic variants. It adds to our understanding of the genetic architecture of cognitive function in Hispanic and Latino adults and demonstrates the power of admixture mapping to discover unique haplotypes influencing cognitive function, complementing genome-wide association studies. HIGHLIGHTS: We identified nine ancestry-of-origin chromosomal regions associated with five neurocognitive traits. In each associated region, we identified single nucleotide polymorphisms (SNPs) that explained, at least in part, the admixture signal and were tested for replication in independent samples of Black, non-Hispanic White, and Hispanic/Latino adults with the same or similar neurocognitive tests. Statistical evidence of independent replication of the prioritized SNPs was observed for three of the nine associations, at chr4q12, chr9p22.1, and chr13q12.13. At all loci, there was strong biological support for the observed associations to cognitive function and dementia, prioritizing genes such as KIT, implicated in autophagic clearance of neurotoxic proteins and on mast cell and microglial-mediated inflammation; SLC24A2, implicated in synaptic plasticity associated with learning and memory; and MTMR6, implicated in phosphoinositide lipids metabolism.

Indexed as

CognitionGenome-Wide Association StudyHispanic or LatinoAdultAgedFemaleHumansMaleMiddle AgedNeuropsychological TestsPolymorphism, Single Nucleotideadmixture mappingcognitive abilitiesgene mappinggeneticsHispanic/Latinoneurocognitive function

Identifiers

PMID38946675
PMCPMC11497725

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.