Evidence map›Paper›PMID 38945790›Full record

ArticleJournal of pediatric urology2024

Assessing the effects of bladder decellularization protocols on extracellular matrix (ECM) structure, mechanics, and biology.

Felix Yiu, Victoria Lee, Astha Sahoo, Jonathan Shiba, Nohemi Garcia-Soto, George E Aninwene, Vijaya Pandey, James Wohlschlegel, Renea M Sturm

Abstract read
In one paragraph

Article in Journal of pediatric urology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors.

Felix YiuDepartment of Urology, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA, USA.
Victoria LeeDepartment of Urology, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA, USA.
Astha SahooDepartment of Urology, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA, USA.
Jonathan ShibaDepartment of Urology, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA, USA.
Nohemi Garcia-SotoDepartment of Urology, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA, USA.
George E AninweneDepartment of Urology, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA, USA.
Vijaya PandeyProteome Research Center, University of California Los Angeles, Los Angeles, CA, USA.
James WohlschlegelProteome Research Center, University of California Los Angeles, Los Angeles, CA, USA.
Renea M SturmDepartment of Urology, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA, USA. Electronic address: RSturm@mednet.ucla.edu.

Funding

Highly Elastic Biomaterial Development for Urethral ApplicationK08DK134868 · NIDDK · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Renea Sturm · 2023 to 2026
$680k
Engineering biomimetic 3D printed urethral tissue constructs using elastin-based bioinks for urethroplastyR21EB035280 · NIBIB · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI ANNABI, NASIM, STURM, RENEA · 2024 to 2025
$390k
NIBIB NIH HHS R21 EB035280NIDDK NIH HHS K08 DK134868
6 · The paper itself

Abstract

introductionAcellular matrices have historically been applied as biologic scaffolds in surgery, wound care, and tissue engineering, albeit with inconsistent outcomes. One aspect that varies widely between products is the selection of decellularization protocol, yet few studies assess comparative effectiveness of these protocols in preserving mechanics, and protein content. This study characterizes bladder acellular matrix (BAM) using two different detergent and enzymatic protocols, evaluating effects on nuclei and DNA removal (≥90%), structure, tensile properties, and maintenance of extracellular matrix proteins.

methodsPorcine bladders were decellularized with 0.5% Sodium Dodecyl Sulfate (SDS) or 0.25% Trypsin-hypotonic-Triton X-100 hypertonic (TT)-based agitation protocols, followed by DNase/RNase agents. Characterization of BAM included decellularization efficacy (DAPI, DNA quantification), structure (histology and scanning electron microscopy), tensile testing (Instron 345C-1 mechanical tester), and protein presence and diversity (mass spectrometry). SDS and TT data was directly compared to the same native bladder using two-tailed paired t-tests. Native, TT, and SDS cohorts for tensile testing were compared using one-way ANOVA; Tukey's post-hoc tests for among group differences.

resultsEffective nuclei removal was achieved by SDS- and TT-based protocols. However, target DNA removal was achieved with SDS but not TT. SDS more effectively maintained qualitative tissue architecture compared to TT. The tensile modulus of the TT cohort increased, and stretchability decreased after decellularization in both SDS and TT. UTS was unaffected by either protocol. Higher overall diversity and quantity of core matrisome and matrisome-associated proteins was maintained in the SDS vs TT cohort post-decellularization.

conclusionThe results indicated that detergent selection affects multiple aspects of the resultant BAM biologic product. In the selected protocols, SDS was superior to TT efficacy, and maintenance of gross tissue architecture as well as maintenance of ECM proteins. Decellularization increased scaffold resistance to deformation in both cohorts. Future studies applying biologic scaffolds must consider the processing method and agents used to ensure that materials selected are optimized for characteristics that will facilitate effective translational use.

Indexed as

Extracellular MatrixTissue EngineeringUrinary BladderAnimalsDecellularized Extracellular MatrixSwineTissue ScaffoldsDecellularized Extracellular MatrixBladder acellular matrixDecellularizationMechanical testingProteomicsTissue engineering

Identifiers

PMID38945790
PMCPMC12119127

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.