Evidence map›Paper›PMID 38945313›Full record

ArticleGene2024

Vitamin D receptor polymorphisms and associated miRNAs in the development of breast cancer in African American women.

Abrar Aloufi, Joseph Aubee, Kevin Monsalve Vargas, Victor Apprey, Karl Thompson, Robert Copeland, Yasmine Kanaan, Luisel Ricks-Santi, Hassan Brim, Muneer Abbas

Abstract read
In one paragraph

Article in Gene, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Abrar AloufiHoward University, Department of Microbiology, Washington, DC, USA.
Joseph AubeeHoward University, Department of Microbiology, Washington, DC, USA.
Kevin Monsalve VargasMedStar Georgetown University Hospital, Pre/Postoperative Services, Washington, DC, USA.
Victor AppreyThe National Human Genome Center, Howard University, Washington, DC, USA.
Karl ThompsonHoward University, Department of Microbiology, Washington, DC, USA.
Robert CopelandHoward University, Department of Microbiology, Washington, DC, USA.
Yasmine KanaanHoward University, Department of Microbiology, Washington, DC, USA.
Luisel Ricks-SantiCollege of Pharmacy, University of Florida, FL, USA.
Hassan BrimHoward University, Department of Pathology, Washington, DC, USA. Electronic address: hbrim@howard.edu.
Muneer AbbasHoward University, Department of Microbiology, Washington, DC, USA; The National Human Genome Center, Howard University, Washington, DC, USA. Electronic address: m_abbas@howard.edu.

Funding

Sleep Disorders in Adults with Sickle Cell Disease: Frequency, Associations with Cardiovascular and Pain Indicators, and Responses to TreatmentU54MD007597 · NIMHD · HOWARD UNIVERSITY · PI William M. Southerland · 2019 to 2026
$37.7M
PROTEOMICS CORE FACILITYG12MD007597 · NIMHD · HOWARD UNIVERSITY · PI SOUTHERLAND, WILLIAM M. · 2012 to 2018
$14.8M
NIMHD NIH HHS G12 MD007597NIMHD NIH HHS U54 MD007597
6 · The paper itself

Abstract

Breast cancer (BCa) is a prevalent form of cancer in women, exhibiting varying rates and distribution across different ethnic groups. Among these groups, African American (AA) women have the highest incidence of BCa and the lowest levels of Vitamin D (VD). Numerous studies have explored the connection between variations in the VDR gene and BCa risk, particularly in different populations, but research on the AA population remains limited. Epigenetic modifications, including specific microRNAs (miRNAs), can influence gene expression without altering the genetic code and have been implicated in cancer initiation and progression. Our hypothesis suggests that VDR gene variations may increase BCa risk in AA women and that changes in miRNA expression profiles could contribute to BCa development. Using data from the 1000 Genome Project, we identified five VDR gene variants with significant frequency differences between AA and European-American (EA) populations. We genotyped 404 African American BCa cases and controls for five variants using TaqMan® assays. SNPstats assessed their association with BCa risk. The rs1544410 variant's recessive model (A/A) showed a decreased BCa risk in AA (odds ratio 0.33, 95% CI: 0.15-0.73, p-value 0.0041). Conversely, the rs2853563 variant's recessive model (A/A) was linked to an increased BCa risk (odds ratio 4.04, 95% CI: 1.49-10.95, p-value 0.0022). We investigated miRNA expression influenced by VD in HCC1806 Triple-Negative Breast Cancer (TNBC) cell lines with the A/A allele for rs2853563. nCounter® Nanostring technology assessed miRNA profiles after calcitriol treatment. Our results indicated that calcitriol treatment led to reduced expression of six miRNAs, four of which are associated with tumor suppression in the presence of the AA genotype in TNBC cell lines. These findings suggest that specific VDR genotypes could have a potential effect on the miRNAs expression which could potentially serve as markers for cell proliferation in TNBC.

Indexed as

Black or African AmericanBreast NeoplasmsGenetic Predisposition to DiseaseMicroRNAsReceptors, CalcitriolAdultAgedCase-Control StudiesCell Line, TumorFemaleGenotypeHumansMiddle AgedPolymorphism, Single NucleotideMicroRNAsReceptors, CalcitriolVDR protein, humanArrican AmericanBreast CancermiRNASingle Nucleotide PolymorphismTriple Negative Breast CancerVitamin D receptor

Identifiers

PMID38945313
PMCPMC11462433

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.