Evidence map›Paper›PMID 38942514›Full record

ArticleMethods in enzymology2024

Vanadium haloperoxidases as noncanonical terpene synthases.

Jackson T Baumgartner, Lia I Lozano Salazar, Lukas A Varga, Gabriel H Lefebre, Shaun M K McKinnie

Abstract read
In one paragraph

Article in Methods in enzymology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jackson T BaumgartnerDepartment of Chemistry and Biochemistry, University of California, Santa Cruz, Santa Cruz, CA, United States.
Lia I Lozano SalazarDepartment of Chemistry and Biochemistry, University of California, Santa Cruz, Santa Cruz, CA, United States.
Lukas A VargaDepartment of Chemistry and Biochemistry, University of California, Santa Cruz, Santa Cruz, CA, United States.
Gabriel H LefebreDepartment of Chemistry and Biochemistry, University of California, Santa Cruz, Santa Cruz, CA, United States.
Shaun M K McKinnieDepartment of Chemistry and Biochemistry, University of California, Santa Cruz, Santa Cruz, CA, United States. Electronic address: smckinnie@ucsc.edu.

Funding

Identification, characterization, and application of bacterial site-specific vanadium-dependent haloperoxidase enzymesR35GM147235 · NIGMS · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI Shaun Mitchell Kirk McKinnie · 2022 to 2026
$1.9M
NIGMS NIH HHS R35 GM147235NIGMS NIH HHS R35-GM147235–01
6 · The paper itself

Abstract

Vanadium-dependent haloperoxidases (VHPOs) are a unique family of enzymes that utilize vanadate, an aqueous halide ion, and hydrogen peroxide to produce an electrophilic halogen species that can be incorporated into electron rich organic substrates. This halogen species can react with terpene substrates and trigger halonium-induced cyclization in a manner reminiscent of class II terpene synthases. While not all VHPOs act in this capacity, several notable examples from algal and actinobacterial species have been characterized to catalyze regio- and enantioselective reactions on terpene and meroterpenoid substrates, resulting in complex halogenated cyclic terpenes through the action of single enzyme. In this article, we describe the expression, purification, and chemical assays of NapH4, a difficult to express characterized VHPO that catalyzes the chloronium-induced cyclization of its meroterpenoid substrate.

Indexed as

Alkyl and Aryl TransferasesTerpenesCyclizationEnzyme AssaysPeroxidasesSubstrate SpecificityVanadiumAlkyl and Aryl TransferasesPeroxidasesTerpenesterpene synthaseVanadiumActinomycetesBacteriaBiosynthesisChlorinationCyclizationHalogenaseMeroterpenoidNatural productsTerpene synthaseVanadium

Identifiers

PMID38942514
PMCPMC12052527

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.