Evidence map›Paper›PMID 38941469›Full record

ArticleScience advances2024

Glycolysis in hepatic stellate cells coordinates fibrogenic extracellular vesicle release spatially to amplify liver fibrosis.

Shalil Khanal, Yuanhang Liu, Adebowale O Bamidele, Alexander Q Wixom, Alexander M Washington, Nidhi Jalan-Sakrikar, Shawna A Cooper, Ivan Vuckovic, Song Zhang, Jun Zhong and 17 more

Abstract read
In one paragraph

Article in Science advances, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Mechanisms and therapeutic insights into MASH-associated fibrosis.Trends in endocrinology and metabolism: TEM · 2026
    Review
  6. Article
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  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

27 authors.

Shalil KhanalDivision of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN 55905, USA.ORCID 0000-0002-5697-4061
Yuanhang LiuDepartment of Quantitative Health Sciences, Mayo Clinic, Rochester, MN 55905, USA.
Adebowale O BamideleDivision of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN 55905, USA.ORCID 0000-0002-9547-2195
Alexander Q WixomDivision of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN 55905, USA.ORCID 0000-0003-2982-7303
Alexander M WashingtonBiochemistry and Molecular Biology Graduate Program, Mayo Clinic Graduate School of Biomedical Sciences, Mayo Clinic, Rochester, MN 55905, USA.ORCID 0000-0002-9804-3329
Nidhi Jalan-SakrikarDivision of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN 55905, USA.ORCID 0000-0001-6795-0121
Shawna A CooperBiochemistry and Molecular Biology Graduate Program, Mayo Clinic Graduate School of Biomedical Sciences, Mayo Clinic, Rochester, MN 55905, USA.ORCID 0000-0003-2669-7275
Ivan VuckovicMetabolomics Core, Mayo Clinic, Rochester, MN 55905, USA.ORCID 0000-0001-7806-7238
Song ZhangDepartment of Cardiovascular Medicine, Mayo Clinic, Rochester, MN 55905, USA.ORCID 0000-0002-9786-802X
Jun ZhongDepartment of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN 55905, USA.ORCID 0000-0003-3148-4143
Kenneth L JohnsonProteomics Core, Mayo Clinic, Rochester, MN 55905, USA.ORCID 0000-0002-8267-8047
M Cristine CharlesworthProteomics Core, Mayo Clinic, Rochester, MN 55905, USA.
Iljung KimDepartment of Computer Science, Hanyang University, Seoul 04763, Republic of South Korea.ORCID 0009-0000-7924-1293
Yubin YeonDepartment of Computer Science, Hanyang University, Seoul 04763, Republic of South Korea.ORCID 0009-0005-7771-9050
Sangwoong YoonSchool of Computational Sciences, Korea Institute for Advanced Study, Seoul 02455, Republic of South Korea.ORCID 0000-0002-7251-3230
Yung-Kyun NohDepartment of Computer Science, Hanyang University, Seoul 04763, Republic of South Korea.ORCID 0000-0002-6372-9267
Chady MerouehDepartment of Pathology, Division of Anatomic Pathology, Mayo Clinic, Rochester, MN 55905, USA.ORCID 0000-0003-2352-4336
Abdul Aziz TimbillaDivision of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN 55905, USA.ORCID 0009-0004-5960-0374
Usman YaqoobDivision of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN 55905, USA.
Jinhang GaoDivision of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN 55905, USA.ORCID 0000-0003-0480-7867
Yohan KimDepartment of Urology, Mayo Clinic, Rochester, MN 55905, USA.ORCID 0000-0002-2378-0068
Fabrice LucienDepartment of Urology, Mayo Clinic, Rochester, MN 55905, USA.ORCID 0000-0001-6149-345X
Robert C HuebertDivision of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN 55905, USA.
Nissim HayDepartment of Biochemistry and Molecular Genetics, College of Medicine, University of Illinois at Chicago, Chicago, IL 60607, USA.
Michael SimonsCardiovascular Research Center, Yale University, New Haven, CI 06510, USA.ORCID 0000-0003-0348-7734
Vijay H ShahDivision of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN 55905, USA.ORCID 0000-0001-7620-573X
Enis KostallariDivision of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN 55905, USA.ORCID 0000-0002-7138-5580

Funding

Women's Cancer ProgramP30CA015083 · NCI · MAYO CLINIC ROCHESTER · PI Felicity Enders · 1985 to 2026
$151.3M
PILOT AND FEASIBILTY PROGRAMP30DK084567 · NIDDK · MAYO CLINIC ROCHESTER · PI GREGORY J. GORES · 2009 to 2026
$22.2M
Institutional Career Development CoreKL2TR002379 · NCATS · MAYO CLINIC ROCHESTER · PI NILUFER ERTEKIN-TANER · 2017 to 2026
$14.9M
Molecular Mechanisms of Liver Fibrosis (Diversity Supplement)R37AA021171 · NIAAA · MAYO CLINIC ROCHESTER · PI VIJAY H. SHAH · 2019 to 2026
$3.0M
Molecular Mechanisms of Cholestatic FibrogenesisR01DK117861 · NIDDK · MAYO CLINIC ROCHESTER · PI Robert Christian Huebert · 2019 to 2026
$2.8M
Molecular Mechanisms of Liver FibrosisR01AA021171 · NIAAA · MAYO CLINIC ROCHESTER · PI SHAH, VIJAY H. · 2012 to 2018
$2.5M
Pathobiology of liver fibrosisR01DK136511 · NIDDK · MAYO CLINIC ROCHESTER · PI Enis Kostallari · 2023 to 2026
$1.4M
NIDDK Multidisciplinary Predoctoral Training in Discovery and Translational ResearchT32DK124190 · NIDDK · MAYO CLINIC ROCHESTER · PI DANIEL D BILLADEAU, MARK A. MC NIVEN · 2020 to 2026
$1.3M
Gastrointestinal Cues Influence Metabolic Control of Regulatory T cell FunctionK01DK124358 · NIDDK · MAYO CLINIC ROCHESTER · PI BAMIDELE, ADEBOWALE O · 2020 to 2024
$723k
NCATS NIH HHS KL2 TR002379NCI NIH HHS P30 CA015083NIAAA NIH HHS R01 AA021171NIAAA NIH HHS R37 AA021171NIDDK NIH HHS K01 DK124358NIDDK NIH HHS P30 DK084567NIDDK NIH HHS R01 DK117861NIDDK NIH HHS R01 DK136511NIDDK NIH HHS T32 DK124190
6 · The paper itself

Abstract

Liver fibrosis is characterized by the activation of perivascular hepatic stellate cells (HSCs), the release of fibrogenic nanosized extracellular vesicles (EVs), and increased HSC glycolysis. Nevertheless, how glycolysis in HSCs coordinates fibrosis amplification through tissue zone-specific pathways remains elusive. Here, we demonstrate that HSC-specific genetic inhibition of glycolysis reduced liver fibrosis. Moreover, spatial transcriptomics revealed a fibrosis-mediated up-regulation of EV-related pathways in the liver pericentral zone, which was abrogated by glycolysis genetic inhibition. Mechanistically, glycolysis in HSCs up-regulated the expression of EV-related genes such as Ras-related protein Rab-31 (

Indexed as

Extracellular VesiclesGlycolysisHepatic Stellate CellsLiver CirrhosisAnimalsDisease Models, AnimalHumansLiverMaleMiceMice, Inbred C57BLrab GTP-Binding Proteinsrab GTP-Binding Proteins

Identifiers

PMID38941469
PMCPMC11212729

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.