Evidence map›Paper›PMID 38940567›Full record

ArticleApplied and environmental microbiology2024

Development of a logic regression-based approach for the discovery of host- and niche-informative biomarkers in

Daniel Yu, Martin Andersson-Li, Sharon Maes, Lili Andersson-Li, Norman F Neumann, Monica Odlare, Anders Jonsson

Abstract read
In one paragraph

Article in Applied and environmental microbiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Daniel YuSchool of Public Health, University of Alberta, Edmonton, Alberta, Canada.ORCID 0000-0002-9569-1873
Martin Andersson-LiAquabiota, Stockholm, Sweden.
Sharon MaesDepartment of Natural Sciences, Design and Sustainable Development, Mid Sweden University, Östersund, Sweden.
Lili Andersson-LiDepartment of Microbiology, Tumor and Cell Biology, Karolinska Institutet, Solna, Sweden.
Norman F NeumannSchool of Public Health, University of Alberta, Edmonton, Alberta, Canada.ORCID 0000-0003-2708-4964
Monica OdlareDepartment of Natural Sciences, Design and Sustainable Development, Mid Sweden University, Östersund, Sweden.
Anders JonssonDepartment of Natural Sciences, Design and Sustainable Development, Mid Sweden University, Östersund, Sweden.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microbial source tracking leverages a wide range of approaches designed to trace the origins of fecal contamination in aquatic environments. Although source tracking methods are typically employed within the laboratory setting, computational techniques can be leveraged to advance microbial source tracking methodology. Herein, we present a logic regression-based supervised learning approach for the discovery of source-informative genetic markers within intergenic regions across the

Indexed as

BiomarkersEscherichia coliFecesAnimalsCattleChickensGenetic MarkersHumansMiceRegression AnalysisSheepSwineWastewaterWater MicrobiologyBiomarkersGenetic MarkersWastewaterEscherichia colilogic regressionmicrobial source trackingsource attributionsupervised learning

Identifiers

PMID38940567
PMCPMC11267920

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.