Evidence map›Paper›PMID 38940144›Full record

ArticleBioinformatics (Oxford, England)2024

Approximating facial expression effects on diagnostic accuracy via generative AI in medical genetics.

Tanviben Patel, Amna A Othman, Ömer Sümer, Fabio Hellman, Peter Krawitz, Elisabeth André, Molly E Ripper, Chris Fortney, Susan Persky, Ping Hu and 6 more

Erratum issuedAbstract read
In one paragraph

Article in Bioinformatics (Oxford, England), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. ChatGPT in precision medicine.APL bioengineering · 2026
    Review
  4. Article
  5. Review
  6. Article
  7. Artificial intelligence in clinical genetics.European journal of human genetics : EJHG · 2025
    Review
  8. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

16 authors.

Tanviben PatelMedical Genomics Unit, Medical Genetics Branch, National Human Genome Research Institute, Bethesda, MA 20892, United States.
Amna A OthmanMedical Genomics Unit, Medical Genetics Branch, National Human Genome Research Institute, Bethesda, MA 20892, United States.
Ömer SümerInstitute of Computer Science, Augsburg University, Augsburg, Bavaria 86159, Germany.
Fabio HellmanInstitute of Computer Science, Augsburg University, Augsburg, Bavaria 86159, Germany.
Peter KrawitzInstitute for Genomic Statistics and Bioinformatics, University of Bonn, Bonn, North Rhine-Westphalia 53113, Germany.ORCID 0000-0002-3194-8625
Elisabeth AndréInstitute of Computer Science, Augsburg University, Augsburg, Bavaria 86159, Germany.
Molly E RipperMedical Genomics Unit, Medical Genetics Branch, National Human Genome Research Institute, Bethesda, MA 20892, United States.
Chris FortneySocial and Behavioral Research Branch, National Human Genome Research Institute, Bethesda, MA 20892, United States.
Susan PerskySocial and Behavioral Research Branch, National Human Genome Research Institute, Bethesda, MA 20892, United States.ORCID 0000-0002-7768-5744
Ping HuMedical Genomics Unit, Medical Genetics Branch, National Human Genome Research Institute, Bethesda, MA 20892, United States.
Cedrik Tekendo-NgongangMedical Genomics Unit, Medical Genetics Branch, National Human Genome Research Institute, Bethesda, MA 20892, United States.
Suzanna Ledgister HanchardMedical Genomics Unit, Medical Genetics Branch, National Human Genome Research Institute, Bethesda, MA 20892, United States.
Kendall A FlahartyMedical Genomics Unit, Medical Genetics Branch, National Human Genome Research Institute, Bethesda, MA 20892, United States.
Rebekah L WaikelMedical Genomics Unit, Medical Genetics Branch, National Human Genome Research Institute, Bethesda, MA 20892, United States.
Dat DuongMedical Genomics Unit, Medical Genetics Branch, National Human Genome Research Institute, Bethesda, MA 20892, United States.
Benjamin D SolomonMedical Genomics Unit, Medical Genetics Branch, National Human Genome Research Institute, Bethesda, MA 20892, United States.

Funding

Immersive Virtual Environment Testing AreaZIDHG200384 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI PERSKY, SUSAN · 2012 to 2025
$7.1M
Medical Genomics Unit Analytic ProjectsZIAHG200405 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI SOLOMON, BENJAMIN · 2020 to 2025
$4.4M
Intramural Research ProgramNHGRI NIH HHSNIH HHS
6 · The paper itself

Abstract

Artificial intelligence (AI) is increasingly used in genomics research and practice, and generative AI has garnered significant recent attention. In clinical applications of generative AI, aspects of the underlying datasets can impact results, and confounders should be studied and mitigated. One example involves the facial expressions of people with genetic conditions. Stereotypically, Williams (WS) and Angelman (AS) syndromes are associated with a "happy" demeanor, including a smiling expression. Clinical geneticists may be more likely to identify these conditions in images of smiling individuals. To study the impact of facial expression, we analyzed publicly available facial images of approximately 3500 individuals with genetic conditions. Using a deep learning (DL) image classifier, we found that WS and AS images with non-smiling expressions had significantly lower prediction probabilities for the correct syndrome labels than those with smiling expressions. This was not seen for 22q11.2 deletion and Noonan syndromes, which are not associated with a smiling expression. To further explore the effect of facial expressions, we computationally altered the facial expressions for these images. We trained HyperStyle, a GAN-inversion technique compatible with StyleGAN2, to determine the vector representations of our images. Then, following the concept of InterfaceGAN, we edited these vectors to recreate the original images in a phenotypically accurate way but with a different facial expression. Through online surveys and an eye-tracking experiment, we examined how altered facial expressions affect the performance of human experts. We overall found that facial expression is associated with diagnostic accuracy variably in different genetic conditions.

Indexed as

Facial ExpressionArtificial IntelligenceDeep LearningGenetics, MedicalHumansWilliams Syndrome

Identifiers

PMID38940144
PMCPMC11211818

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.