Evidence map›Paper›PMID 38938288›Full record

ArticleJournal of biotechnology and biomedicine2023

cProSite: A web based interactive platform for online proteomics, phosphoproteomics, and genomics data analysis.

Dunrui Wang, Xiaolan Qian, Yi-Chieh Nancy Du, Beatriz Sanchez-Solana, Kailing Chen, Madhu Kanigicherla, Lisa M Jenkins, Jason Luo, Sarah Eng, Brian Park and 6 more

Abstract read
In one paragraph

Article in Journal of biotechnology and biomedicine, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed.

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  13. Switching of the c-Myc protein degradation pathway depending on the PP2A-B55α complex levels.Proceedings of the National Academy of Sciences of the United States of America · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Dunrui WangLaboratory of Cellular Oncology, National Cancer Institute, National Institutes of Health, Bethesda, MD.
Xiaolan QianLaboratory of Cellular Oncology, National Cancer Institute, National Institutes of Health, Bethesda, MD.
Yi-Chieh Nancy DuDepartment of Pathology and Laboratory Medicine, Weill Cornell Medicine, New York, NY.
Beatriz Sanchez-SolanaLaboratory of Cellular Oncology, National Cancer Institute, National Institutes of Health, Bethesda, MD.
Kailing ChenCenter for Biomedical Informatics and Information Technology, National Cancer Institute, Rockville, MD.
Madhu KanigicherlaCenter for Biomedical Informatics and Information Technology, National Cancer Institute, Rockville, MD.
Lisa M JenkinsCollaborative Protein Technology Resource, National Cancer Institute, National Institutes of Health, Bethesda, MD.
Jason LuoLaboratory of Cellular Oncology, National Cancer Institute, National Institutes of Health, Bethesda, MD.
Sarah EngLaboratory of Cellular Oncology, National Cancer Institute, National Institutes of Health, Bethesda, MD.
Brian ParkCenter for Biomedical Informatics and Information Technology, National Cancer Institute, Rockville, MD.
Ben ChenCenter for Biomedical Informatics and Information Technology, National Cancer Institute, Rockville, MD.
Xiaozheng YaoCenter for Biomedical Informatics and Information Technology, National Cancer Institute, Rockville, MD.
Thuong NguyenCenter for Biomedical Informatics and Information Technology, National Cancer Institute, Rockville, MD.
Brajendra K TripathiLaboratory of Cellular Oncology, National Cancer Institute, National Institutes of Health, Bethesda, MD.
Marian E DurkinLaboratory of Cellular Oncology, National Cancer Institute, National Institutes of Health, Bethesda, MD.
Douglas R LowyLaboratory of Cellular Oncology, National Cancer Institute, National Institutes of Health, Bethesda, MD.

Funding

TUMOR GENE EXPRESSION IN VITRO AND IN VIVOZ01BC008905 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI LOWY, DOUGLAS R. · 1996 to 2008
$1.2M
Intramural NIH HHS Z01 BC008905
6 · The paper itself

Abstract

We developed cProSite, a website that provides online genomics, proteomics, and phosphoproteomics analysis for the data of The National Cancer Institute's Clinical Proteomic Tumor Analysis Consortium (CPTAC). This tool focuses on comparisons and correlations between different proteins and mRNAs of tumors and normal tissues. Our website is designed with biologists and clinicians in mind, with a user-friendly environment and fast search engine. The search results of cProSite can be used for clinical data validation and provide useful strategic information to identify drug targets at proteomic, phosphoproteomic, or genomic levels. The site is available at http://cprosite.ccr.cancer.gov.

Identifiers

PMID38938288
PMCPMC11210690

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.