Evidence map›Paper›PMID 38937694›Full record

ArticleBMC cancer2024

System-wide identification of novel de-ubiquitination targets for USP10 in gastric cancer metastasis through multi-omics screening.

Zhi Zeng, Yina Li, Heng Zhou, Mingyang Li, Juan Ye, Dan Li, Yuxi Zhu, Yonggang Zhang, Xu Zhang, Yunchao Deng and 3 more

Abstract read
In one paragraph

Article in BMC cancer, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Zhi Zeng *Department of Pathology, Renmin Hospital of Wuhan University, Wuhan, Hubei, China.
Yina Li *Department of Anesthesiology, Renmin Hospital of Wuhan University, Wuhan, Hubei, China.
Heng ZhouDepartment of Pathology, Renmin Hospital of Wuhan University, Wuhan, Hubei, China.
Mingyang LiDepartment of Neurosurgery, Renmin Hospital of Wuhan University, Wuhan, Hubei, China.
Juan YeDepartment of Pharmacy, Huazhong University of Science and Technology Hospital, Wuhan, Hubei, China.
Dan LiDepartment of Pharmacy, Renmin Hospital of Wuhan University, Wuhan, Hubei, China.
Yuxi ZhuDivision of Biostatistics, College of Public Health, The Ohio State University, Columbus, OH, USA.
Yonggang ZhangDepartment of Neurosurgery, Renmin Hospital of Wuhan University, Wuhan, Hubei, China.
Xu ZhangDepartment of Neurosurgery, Renmin Hospital of Wuhan University, Wuhan, Hubei, China.
Yunchao DengDepartment of Gastroenterology, Renmin Hospital of Wuhan University, Wuhan, Hubei, China.
Juan LiHubei Key Laboratory of Resources and Chemistry of Chinese Medicine, School of Pharmacy, Hubei University of Chinese Medicine, Wuhan, Hubei, China.
Lijuan GuDepartment of Anesthesiology, Renmin Hospital of Wuhan University, Wuhan, Hubei, China. gulijuan@whu.edu.cn.
Jie WuDepartment of Pharmacy, Renmin Hospital of Wuhan University, Wuhan, Hubei, China. jiewu2014@whu.edu.cn.

Funding

China International Medical Foundation Z-2021-46-2101-2023Chinese Pharmaceutical Association Hospital Pharmacy department CPA-Z05-ZC-2022-002Hubei Key Laboratory of Resources and Chemistry of Chinese Medicine KLRCCM2306National Natural Science Foundation of China 81602535National Natural Science Foundation of China 81803789National Natural Science Foundation of China 82071339
6 · The paper itself

Abstract

objectiveUbiquitin-specific peptidase 10 (USP10), a typical de-ubiquitinase, has been found to play a double-edged role in human cancers. Previously, we reported that the expression of USP10 was negatively correlated with the depth of gastric wall invasion, lymph node metastasis, and prognosis in gastric cancer (GC) patients. However, it remains unclear whether USP10 can regulate the metastasis of GC cells through its de-ubiquitination function.

methodsIn this study, proteome, ubiquitinome, and transcriptome analyses were conducted to comprehensively identify novel de-ubiquitination targets for USP10 in GC cells. Subsequently, a series of validation experiments, including in vitro cell culture studies, in vivo metastatic tumor models, and clinical sample analyses, were performed to elucidate the regulatory mechanism of USP10 and its de-ubiquitination targets in GC metastasis.

resultsAfter overexpression of USP10 in GC cells, 146 proteins, 489 ubiquitin sites, and 61 mRNAs exhibited differential expression. By integrating the results of multi-omics, we ultimately screened 9 potential substrates of USP10, including TNFRSF10B, SLC2A3, CD44, CSTF2, RPS27, TPD52, GPS1, RNF185, and MED16. Among them, TNFRSF10B was further verified as a direct de-ubiquitination target for USP10 by Co-IP and protein stabilization assays. The dysregulation of USP10 or TNFRSF10B affected the migration and invasion of GC cells in vitro and in vivo models. Molecular mechanism studies showed that USP10 inhibited the epithelial-mesenchymal transition (EMT) process by increasing the stability of TNFRSF10B protein, thereby regulating the migration and invasion of GC cells. Finally, the retrospective clinical sample studies demonstrated that the downregulation of TNFRSF10B expression was associated with poor survival among 4 of 7 GC cohorts, and the expression of TNFRSF10B protein was significantly negatively correlated with the incidence of distant metastasis, diffuse type, and poorly cohesive carcinoma.

conclusionsOur study established a high-throughput strategy for screening de-ubiquitination targets for USP10 and further confirmed that inhibiting the ubiquitination of TNFRSF10B might be a promising therapeutic strategy for GC metastasis.

Indexed as

Stomach NeoplasmsUbiquitinationUbiquitin ThiolesteraseAnimalsCell Line, TumorCell MovementEpithelial-Mesenchymal TransitionFemaleGene Expression ProfilingGene Expression Regulation, NeoplasticHumansMaleMiceMultiomicsNeoplasm MetastasisPrognosisUbiquitin ThiolesteraseUSP10 protein, humanEMTGastric cancerMigration and invasionTNFRSF10BUbiquitinationUSP10

Identifiers

PMID38937694
PMCPMC11209979

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.