Evidence map›Paper›PMID 38935561›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2024

An RNA pseudoknot mediates toxin translation and antitoxin inhibition.

Athina Eleftheraki, Erik Holmqvist

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Disentangling the pseudoknots of toxin translation.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

2 authors.

Athina EleftherakiDepartment of Cell and Molecular Biology, Biomedical Center, Uppsala University, Uppsala 75124, Sweden.ORCID 0009-0002-9424-0314
Erik HolmqvistDepartment of Cell and Molecular Biology, Biomedical Center, Uppsala University, Uppsala 75124, Sweden.ORCID 0000-0001-7834-1487

Funding

Uppsala Antibiotic Center 2021Vetenskapsr&ådet (VR) 2021-04657
6 · The paper itself

Abstract

Type I toxin-antitoxin systems (T1TAs) are bipartite bacterial loci encoding a growth-inhibitory toxin and an antitoxin small RNA (sRNA). In many of these systems, the transcribed toxin mRNA is translationally inactive, but becomes translation-competent upon ribonucleolytic processing. The antitoxin sRNA targets the processed mRNA to inhibit its translation. This two-level control mechanism prevents cotranscriptional translation of the toxin and allows its synthesis only when the antitoxin is absent. Contrary to this, we found that the

Indexed as

Nucleic Acid ConformationProtein BiosynthesisRNA, BacterialRNA, MessengerToxin-Antitoxin SystemsAntitoxinsBacterial ToxinsEscherichia coliGene Expression Regulation, BacterialAntitoxinsBacterial ToxinsRNA, BacterialRNA, Messengerposttranscriptional regulationRNA structuresmall RNAtoxin–antitoxintranslation control

Identifiers

PMID38935561
PMCPMC11228461

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.