Evidence map›Paper›PMID 38935150›Full record

ArticleArchives of microbiology2024

Physiology and comparative genomics of the haloalkalitolerant and hydrocarbonoclastic marine strain Rhodococcus ruber MSA14.

Salvador Embarcadero-Jiménez, Cynthia Lizzeth Araujo-Palomares, Tonatiuh Moreno-Perlín, Nancy Ramírez-Álvarez, Cristina Quezada-Hernández, Ramón Alberto Batista-García, Alejandro Sanchez-Flores, Gabriela Calcáneo-Hernández, Hortencia Silva-Jiménez

Abstract read
PubMed Publisher
In one paragraph

Article in Archives of microbiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Salvador Embarcadero-JiménezInstituto de Investigaciones Oceanológicas, Universidad Autónoma de Baja California, Carretera Tijuana-Ensenada, No. 3917, Fraccionamiento Playitas, Ensenada, Baja California, 22860, México.ORCID https://orcid.org/0000-0002-0442-3356
Cynthia Lizzeth Araujo-PalomaresInstituto de Investigaciones Oceanológicas, Universidad Autónoma de Baja California, Carretera Tijuana-Ensenada, No. 3917, Fraccionamiento Playitas, Ensenada, Baja California, 22860, México.ORCID https://orcid.org/0000-0002-5007-8426
Tonatiuh Moreno-PerlínCentro de Investigación en Dinámica Celular, Instituto de Investigación en Ciencias Básicas y Aplicadas, Universidad Autónoma del Estado de Morelos, Av. Universidad 1001, Col. Chamilpa, Cuernavaca, C.P. 62209, México.ORCID https://orcid.org/0000-0003-0584-0853
Nancy Ramírez-ÁlvarezInstituto de Investigaciones Oceanológicas, Universidad Autónoma de Baja California, Carretera Tijuana-Ensenada, No. 3917, Fraccionamiento Playitas, Ensenada, Baja California, 22860, México.ORCID https://orcid.org/0000-0002-5372-549X
Cristina Quezada-HernándezInstituto de Investigaciones Oceanológicas, Universidad Autónoma de Baja California, Carretera Tijuana-Ensenada, No. 3917, Fraccionamiento Playitas, Ensenada, Baja California, 22860, México.ORCID https://orcid.org/0000-0003-3282-2140
Ramón Alberto Batista-GarcíaCentro de Investigación en Dinámica Celular, Instituto de Investigación en Ciencias Básicas y Aplicadas, Universidad Autónoma del Estado de Morelos, Av. Universidad 1001, Col. Chamilpa, Cuernavaca, C.P. 62209, México.ORCID https://orcid.org/0000-0002-1032-0767
Alejandro Sanchez-FloresInstituto de Biotecnología, Unidad Universitaria de Secuenciación Masiva y Bioinformática, Universidad Nacional Autónoma de México, Av. Universidad 2001, Col. Chamilpa, Cuernavaca, C.P. 62210, México.ORCID https://orcid.org/0000-0003-0476-3139
Gabriela Calcáneo-HernándezInstituto de Fisiología Celular, Universidad Nacional Autónoma de México, Circuito Exterior s/n, Ciudad Universitaria, Coyoacán, Ciudad de México, C.P. 04510, México.ORCID https://orcid.org/0000-0001-8035-2142
Hortencia Silva-JiménezInstituto de Investigaciones Oceanológicas, Universidad Autónoma de Baja California, Carretera Tijuana-Ensenada, No. 3917, Fraccionamiento Playitas, Ensenada, Baja California, 22860, México. silvah@uabc.edu.mx.

Funding

SPECIFICITY OF OXYGEN DNA DAMAGE AND MUTAGENESISP01AG001751 · NIA · UNIVERSITY OF WASHINGTON · PI PRUSKY, GLEN THOMAS · 1985 to 2021
$29.6M
Estancias Posdoctorales por México, CONAHCYT, México 2381691Estancias Posdoctorales por México, CONAHCYT, México 2482423Estancias Posdoctorales por México, CONAHCYT, México 2624207Program for the Professional Development of Teachers for Higher Education (PRODEP) of the Mexican Ministry of Public Education UABC-PTC-621Universidad Autónoma de Baja California IIO-UABC 403/1751
6 · The paper itself

Abstract

Marine hydrocarbonoclastic bacteria can use polycyclic aromatic hydrocarbons as carbon and energy sources, that makes these bacteria highly attractive for bioremediation in oil-polluted waters. However, genomic and metabolic differences between species are still the subject of study to understand the evolution and strategies to degrade PAHs. This study presents Rhodococcus ruber MSA14, an isolated bacterium from marine sediments in Baja California, Mexico, which exhibits adaptability to saline environments, a high level of intrinsic pyrene tolerance (> 5 g L

Indexed as

Biodegradation, EnvironmentalGenome, BacterialGenomicsGeologic SedimentsPolycyclic Aromatic HydrocarbonsRhodococcusNaphthalenesPhenanthrenesPhylogenyPyrenesSalt TolerancenaphthaleneNaphthalenesphenanthrenePhenanthrenesPolycyclic Aromatic HydrocarbonspyrenePyrenesGenome sequencingHydrocarbonoclastic bacteriaPolycyclic aromatic hydrocarbonPyrene degradationRhodococcusTolerance

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.