Evidence map›Paper›PMID 38928209›Full record

ArticleInternational journal of molecular sciences2024

In Vivo Expression of Chicken Gut Anaerobes Identifies Carbohydrate- or Amino Acid-Utilising, Motile or Type VI Secretion System-Expressing Bacteria.

Jana Rajova, Michal Zeman, Zuzana Seidlerova, Lenka Vlasatikova, Jitka Matiasovicova, Alena Sebkova, Marcela Faldynova, Hana Prikrylova, Daniela Karasova, Magdalena Crhanova and 4 more

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Jana RajovaVeterinary Research Institute, CZ6210 Brno, Czech Republic.
Michal ZemanVeterinary Research Institute, CZ6210 Brno, Czech Republic.ORCID 0000-0002-0714-9831
Zuzana SeidlerovaVeterinary Research Institute, CZ6210 Brno, Czech Republic.
Lenka VlasatikovaVeterinary Research Institute, CZ6210 Brno, Czech Republic.
Jitka MatiasovicovaVeterinary Research Institute, CZ6210 Brno, Czech Republic.
Alena SebkovaVeterinary Research Institute, CZ6210 Brno, Czech Republic.
Marcela FaldynovaVeterinary Research Institute, CZ6210 Brno, Czech Republic.
Hana PrikrylovaVeterinary Research Institute, CZ6210 Brno, Czech Republic.
Daniela KarasovaVeterinary Research Institute, CZ6210 Brno, Czech Republic.ORCID 0000-0003-3044-2187
Magdalena CrhanovaVeterinary Research Institute, CZ6210 Brno, Czech Republic.
Pavel KulichVeterinary Research Institute, CZ6210 Brno, Czech Republic.
Vladimir BabakVeterinary Research Institute, CZ6210 Brno, Czech Republic.ORCID 0000-0002-0826-1075
Jiri VolfVeterinary Research Institute, CZ6210 Brno, Czech Republic.
Ivan RychlikVeterinary Research Institute, CZ6210 Brno, Czech Republic.

Funding

Ministry of Agriculture of the Czech Republic QK22020066Ministry of Agriculture of the Czech Republic RO0523
6 · The paper itself

Abstract

Complex gut microbiota increases chickens' resistance to enteric pathogens. However, the principles of this phenomenon are not understood in detail. One of the possibilities for how to decipher the role of gut microbiota in chickens' resistance to enteric pathogens is to systematically characterise the gene expression of individual gut microbiota members colonising the chicken caecum. To reach this aim, newly hatched chicks were inoculated with bacterial species whose whole genomic sequence was known. Total protein purified from the chicken caecum was analysed by mass spectrometry, and the obtained spectra were searched against strain-specific protein databases generated from known genomic sequences.

Indexed as

Bacteria, AnaerobicChickensGastrointestinal MicrobiomeAmino AcidsAnimalsCarbohydrate MetabolismCecumType IV Secretion SystemsAmino AcidsType IV Secretion Systemsanaerobecaecumchicken microbiotagene expressionmass spectrometrymetabolism

Identifiers

PMID38928209
PMCPMC11204068

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.