Evidence map›Paper›PMID 38927081›Full record

ArticleBiomolecules2024

Examining Transcriptomic Alterations in Rat Models of Intracerebral Hemorrhage and Severe Intracerebral Hemorrhage.

Shaik Ismail Mohammed Thangameeran, Sheng-Tzung Tsai, Hock-Kean Liew, Cheng-Yoong Pang

Erratum issuedAbstract read
In one paragraph

Article in Biomolecules, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors.

Shaik Ismail Mohammed ThangameeranInstitute of Medical Sciences, Tzu Chi University, Hualien 97004, Taiwan.
Sheng-Tzung TsaiInstitute of Medical Sciences, Tzu Chi University, Hualien 97004, Taiwan.ORCID 0000-0001-6611-9440
Hock-Kean LiewNeuro-Medical Scientific Center, Hualien Tzu Chi Hospital, Buddhist Tzu Chi Medical Foundation, Hualien 97004, Taiwan.ORCID 0000-0002-5981-4100
Cheng-Yoong PangInstitute of Medical Sciences, Tzu Chi University, Hualien 97004, Taiwan.ORCID 0000-0002-9063-2858

Funding

National Science and Technology Council, Taiwan NSTC 110-2314-B-303 -018 - & NSTC 111-2314-B-303 -029 -
6 · The paper itself

Abstract

Intracerebral hemorrhage (ICH) is a life-threatening condition associated with significant morbidity and mortality. This study investigates transcriptomic alterations in rodent models of ICH and severe ICH to shed light on the genetic pathways involved in hemorrhagic brain injury. We performed principal component analysis, revealing distinct principal component segments of normal rats compared to ICH and severe ICH rats. We employed heatmaps and volcano plots to identify differentially expressed genes and utilized bar plots and KEGG pathway analysis to elucidate the molecular pathways involved. We identified a multitude of differentially expressed genes in both the ICH and severe ICH models. Our results revealed 5679 common genes among the normal, ICH, and severe ICH groups in the upregulated genes group, and 1196 common genes in the downregulated genes, respectively. A volcano plot comparing these groups further highlighted common genes, including PDPN, TIMP1, SERPINE1, TUBB6, and CD44. These findings underscore the complex interplay of genes involved in inflammation, oxidative stress, and neuronal damage. Furthermore, pathway enrichment analysis uncovered key signaling pathways, including the TNF signaling pathway, protein processing in the endoplasmic reticulum, MAPK signaling pathway, and Fc gamma R-mediated phagocytosis, implicated in the pathogenesis of ICH.

Indexed as

Cerebral HemorrhageDisease Models, AnimalRats, Sprague-DawleyTranscriptomeAnimalsGene Expression ProfilingGene Expression RegulationMalePrincipal Component AnalysisRatsSignal Transductiongene expressionintracerebral hemorrhageneuroinflammationsevere intracerebral hemorrhagetranscriptomics

Identifiers

PMID38927081
PMCPMC11202056

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.