Evidence map›Paper›PMID 38927020›Full record

ArticleBiomolecules2024

Crystal Violet Selectively Detects Aβ Oligomers but Not Fibrils In Vitro and in Alzheimer's Disease Brain Tissue.

Kanchana Karunarathne, Teresa R Kee, Hanna Jeon, Sara Cazzaro, Yasith I Gamage, Jianjun Pan, Jung-A A Woo, David E Kang, Martin Muschol

Abstract read
In one paragraph

Article in Biomolecules, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Kanchana KarunarathneDepartment of Physics, University of South Florida, Tampa, FL 33620, USA.
Teresa R KeeDepartment of Molecular Medicine, USF Health, Morsani College of Medicine, Tampa, FL 33620, USA.ORCID 0000-0003-4140-6341
Hanna JeonDepartment of Pathology, School of Medicine, Case Western Reserve University, Cleveland, OH 44106, USA.ORCID 0000-0002-7137-5729
Sara CazzaroDepartment of Molecular Medicine, USF Health, Morsani College of Medicine, Tampa, FL 33620, USA.
Yasith I GamageDepartment of Physics, University of South Florida, Tampa, FL 33620, USA.ORCID 0009-0006-9683-6209
Jianjun PanDepartment of Physics, University of South Florida, Tampa, FL 33620, USA.
Jung-A A WooDepartment of Pathology, School of Medicine, Case Western Reserve University, Cleveland, OH 44106, USA.ORCID 0000-0002-9194-1361
David E KangDepartment of Pathology, School of Medicine, Case Western Reserve University, Cleveland, OH 44106, USA.
Martin MuscholDepartment of Physics, University of South Florida, Tampa, FL 33620, USA.

Funding

Pathological Signatures of CHCHD10 Dysfunction in ADRDsR01NS122350 · NINDS · CASE WESTERN RESERVE UNIVERSITY · PI KANG, DAVID E · 2021 to 2025
$2.0M
Deubiquitinase USP11 in tau regulation and age-related tauopathyR01AG067741 · NIA · UNIVERSITY OF SOUTH FLORIDA · PI KANG, DAVID E, WOO, JUNGA "ALEXA" · 2020 to 2024
$2.0M
Novel role of β-arrestins in TauopathyR01AG059721 · NIA · UNIVERSITY OF SOUTH FLORIDA · PI WOO, JUNGA "ALEXA" · 2019 to 2023
$1.9M
Role of the Slingshot-1 pathway in APP and Tau pathogenesisRF1AG053060 · NIA · UNIVERSITY OF SOUTH FLORIDA · PI KANG, DAVID E · 2017 to 2017
$1.9M
Fluorescent probes for detection of misfolded protein oligomers in Alzheimer's Disease and related disordersR21AG077735 · NIA · UNIVERSITY OF SOUTH FLORIDA · PI KANG, DAVID E, MUSCHOL, MARTIN · 2023 to 2024
$429k
BLRD VA I01 BX004680NIA NIH HHS R01 AG059721NIA NIH HHS R21 AG077735NIA NIH HHS RF1 AG053060NIH HHS R01AG059721NIH HHS R01AG067741NIH HHS R01NS122350NIH HHS R21AG077735NIH HHS RF1AG053060NINDS NIH HHS R01 NS122350United States Department of Veterans Affairs BX004680
6 · The paper itself

Abstract

Deposition of extracellular Amyloid Beta (Aβ) and intracellular tau fibrils in post-mortem brains remains the only way to conclusively confirm cases of Alzheimer's Disease (AD). Substantial evidence, though, implicates small globular oligomers instead of fibrils as relevant biomarkers of, and critical contributors to, the clinical symptoms of AD. Efforts to verify and utilize amyloid oligomers as AD biomarkers in vivo have been limited by the near-exclusive dependence on conformation-selective antibodies for oligomer detection. While antibodies have yielded critical evidence for the role of both Aβ and tau oligomers in AD, they are not suitable for imaging amyloid oligomers in vivo. Therefore, it would be desirable to identify a set of oligomer-selective small molecules for subsequent development into Positron Emission Tomography (PET) probes. Using a kinetics-based screening assay, we confirm that the triarylmethane dye Crystal Violet (CV) is oligomer-selective for Aβ42 oligomers (AβOs) grown under near-physiological solution conditions in vitro. In postmortem brains of an AD mouse model and human AD patients, we demonstrate that A11 antibody-positive oligomers but not Thioflavin S (ThioS)-positive fibrils colocalize with CV staining, confirming in vitro results. Therefore, our kinetic screen represents a robust approach for identifying new classes of small molecules as candidates for oligomer-selective dyes (OSDs). Such OSDs, in turn, provide promising starting points for the development of PET probes for pre-mortem imaging of oligomer deposits in humans.

Indexed as

Alzheimer DiseaseAmyloid beta-PeptidesBrainGentian VioletAmyloidAnimalsFemaleHumansMicePositron-Emission TomographyAmyloidAmyloid beta-PeptidesGentian VioletAlzheimer’s Diseaseamyloid betaamyloid oligomersCrystal VioletfluorescenceThioflavin Ttissue staining

Identifiers

PMID38927020
PMCPMC11201545

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.