Evidence map›Paper›PMID 38926911›Full record

ArticleCancer biology & therapy2024

Neuroendocrine gene subsets are uniquely dysregulated in prostate adenocarcinoma.

Nicole M Naranjo, Anne Kennedy, Anna Testa, Cecilia E Verrillo, Adrian D Altieri, Rhonda Kean, D Craig Hooper, Jindan Yu, Jonathan Zhao, Oliver Abinader and 5 more

Abstract read
In one paragraph

Article in Cancer biology & therapy, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Nicole M NaranjoProstate Cancer Discovery and Development Program, Thomas Jefferson University, Philadelphia, PA, USA.
Anne KennedyProstate Cancer Discovery and Development Program, Thomas Jefferson University, Philadelphia, PA, USA.
Anna TestaProstate Cancer Discovery and Development Program, Thomas Jefferson University, Philadelphia, PA, USA.
Cecilia E VerrilloProstate Cancer Discovery and Development Program, Thomas Jefferson University, Philadelphia, PA, USA.
Adrian D AltieriDepartment of Pharmacology, Physiology and Cancer Biology, Thomas Jefferson University, Philadelphia, PA, USA.
Rhonda KeanDepartment of Pharmacology, Physiology and Cancer Biology, Thomas Jefferson University, Philadelphia, PA, USA.
D Craig HooperDepartment of Pharmacology, Physiology and Cancer Biology, Thomas Jefferson University, Philadelphia, PA, USA.
Jindan YuDepartment of Urology, Emory University School of Medicine, Atlanta, GA, USA.
Jonathan ZhaoDepartment of Human Genetics, Emory University School of Medicine, Atlanta, GA, USA.
Oliver AbinaderDivision of Biostatistics and Bioinformatics, Department of Pharmacology, Physiology and Cancer Biology, Thomas Jefferson University, Philadelphia, PA, USA.
Maxwell W PicklesProstate Cancer Discovery and Development Program, Thomas Jefferson University, Philadelphia, PA, USA.
Adam HawkinsProstate Cancer Discovery and Development Program, Thomas Jefferson University, Philadelphia, PA, USA.
William K KellyProstate Cancer Discovery and Development Program, Thomas Jefferson University, Philadelphia, PA, USA.
Ramkrishna MitraDivision of Biostatistics and Bioinformatics, Department of Pharmacology, Physiology and Cancer Biology, Thomas Jefferson University, Philadelphia, PA, USA.
Lucia R LanguinoProstate Cancer Discovery and Development Program, Thomas Jefferson University, Philadelphia, PA, USA.ORCID 0000-0001-9011-7031

Funding

X-Ray Crystallography and Macromolecular CharacterizationP30CA056036 · NCI · THOMAS JEFFERSON UNIVERSITY · PI Claudio Guillermo Giraudo · 1995 to 2026
$94.8M
Genomic profiling of single circulating tumor cells in the precision medicine of metastatic prostate cancerR01CA255792 · NCI · THOMAS JEFFERSON UNIVERSITY · PI KELLY, WILLIAM K., LU-YAO, GRACE · 2021 to 2025
$3.2M
Integrin-mediated mechanisms of prostate cancer progressionR01CA224769 · NCI · THOMAS JEFFERSON UNIVERSITY · PI LANGUINO, LUCIA R. · 2018 to 2022
$2.0M
Targeting Cell Cycle Alterations to Improve Treatment for Advanced Prostate CancerR01CA217329 · NCI · THOMAS JEFFERSON UNIVERSITY · PI KELLY, WILLIAM K., MCNAIR, CHRISTOPHER MICHAEL · 2017 to 2021
$1.8M
Training Program in Cancer BiologyT32CA236736 · NCI · THOMAS JEFFERSON UNIVERSITY · PI APLIN, ANDREW ERIC, LANGUINO, LUCIA R. · 2019 to 2023
$1.1M
NCI NIH HHS P30 CA056036NCI NIH HHS R01 CA217329NCI NIH HHS R01 CA224769NCI NIH HHS R01 CA255792NCI NIH HHS T32 CA236736
6 · The paper itself

Abstract

Prostate cancer has heterogeneous growth patterns, and its prognosis is the poorest when it progresses to a neuroendocrine phenotype. Using bioinformatic analysis, we evaluated RNA expression of neuroendocrine genes in a panel of five different cancer types: prostate adenocarcinoma, breast cancer, kidney chromophobe, kidney renal clear cell carcinoma and kidney renal papillary cell carcinoma. Our results show that specific neuroendocrine genes are significantly dysregulated in these tumors, suggesting that they play an active role in cancer progression. Among others, synaptophysin (SYP), a conventional neuroendocrine marker, is upregulated in prostate adenocarcinoma (PRAD) and breast cancer (BRCA). Our analysis shows that SYP is enriched in small extracellular vesicles (sEVs) derived from plasma of PRAD patients, but it is absent in sEVs derived from plasma of healthy donors. Similarly, classical sEV markers are enriched in sEVs derived from plasma of prostate cancer patients, but weakly detectable in sEVs derived from plasma of healthy donors. Overall, our results pave the way to explore new strategies to diagnose these diseases based on the neuroendocrine gene expression in patient tumors or plasma sEVs.

Indexed as

AdenocarcinomaProstatic NeoplasmsBiomarkers, TumorExtracellular VesiclesGene Expression ProfilingGene Expression Regulation, NeoplasticHumansMaleSynaptophysinBiomarkers, TumorSynaptophysinexosomesextracellular vesiclesneuroendocrine genespatient plasmaProstate cancersynaptophysin

Identifiers

PMID38926911
PMCPMC11212568

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.