Evidence map›Paper›PMID 38926334›Full record

ArticleNature communications2024

Alkylamine-tethered molecules recruit FBXO22 for targeted protein degradation.

Chrysanthi Kagiou, Jose A Cisneros, Jakob Farnung, Joanna Liwocha, Fabian Offensperger, Kevin Dong, Ka Yang, Gary Tin, Christina S Horstmann, Matthias Hinterndorfer and 11 more

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Proteomics-Driven Strategies for Proximity-Inducing Drug Discovery.Angewandte Chemie (International ed. in English) · 2026
    Review
  6. Article
  7. Covalent Reprogramming of Kinase Binders to Modulate Protein Abundance.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  8. Article
  9. Article
  10. Article
  11. Small-molecule degraders for oncogenic KRASNature communications · 2026
    Article
  12. Article
  13. Article
  14. Article
  15. Covalent Reprogramming of Kinase Binders to Modulate Protein Homeostasis.bioRxiv : the preprint server for biology · 2025
    Article
  16. Article
  17. Review
  18. Designing the Proteome with Chemical Tools: Degrons and Beyond.Chembiochem : a European journal of chemical biology · 2025
    Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors.

Chrysanthi KagiouCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, 1090, Vienna, Austria.ORCID http://orcid.org/0000-0002-2795-1194
Jose A CisnerosCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, 1090, Vienna, Austria.ORCID http://orcid.org/0000-0003-3679-7878
Jakob FarnungDepartment of Molecular Machines and Signaling, Max Planck Institute of Biochemistry, Martinsried, Germany.ORCID http://orcid.org/0000-0002-4619-3421
Joanna LiwochaDepartment of Molecular Machines and Signaling, Max Planck Institute of Biochemistry, Martinsried, Germany.
Fabian OffenspergerCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, 1090, Vienna, Austria.ORCID http://orcid.org/0009-0008-4304-2346
Kevin DongDepartment of Cell Biology, Harvard Medical School, Boston, MA, USA.
Ka YangDepartment of Cell Biology, Harvard Medical School, Boston, MA, USA.ORCID http://orcid.org/0000-0001-8937-7397
Gary TinCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, 1090, Vienna, Austria.ORCID http://orcid.org/0009-0005-1298-3221
Christina S HorstmannCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, 1090, Vienna, Austria.
Matthias HinterndorferCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, 1090, Vienna, Austria.
Joao A PauloDepartment of Cell Biology, Harvard Medical School, Boston, MA, USA.ORCID http://orcid.org/0000-0002-4291-413X
Natalie S ScholesCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, 1090, Vienna, Austria.ORCID http://orcid.org/0000-0002-1053-4079
Juan Sanchez AvilaCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, 1090, Vienna, Austria.ORCID http://orcid.org/0000-0002-5920-7618
Michaela FellnerResearch Institute of Molecular Pathology, Vienna BioCenter, 1030, Vienna, Austria.
Florian AnderschResearch Institute of Molecular Pathology, Vienna BioCenter, 1030, Vienna, Austria.
J Thomas HannichCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, 1090, Vienna, Austria.ORCID http://orcid.org/0000-0002-2286-4956
Johannes ZuberResearch Institute of Molecular Pathology, Vienna BioCenter, 1030, Vienna, Austria.ORCID http://orcid.org/0000-0001-8810-6835
Stefan KubicekCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, 1090, Vienna, Austria.ORCID http://orcid.org/0000-0003-0855-8343
Steven P GygiDepartment of Cell Biology, Harvard Medical School, Boston, MA, USA.ORCID http://orcid.org/0000-0001-7626-0034
Brenda A SchulmanDepartment of Molecular Machines and Signaling, Max Planck Institute of Biochemistry, Martinsried, Germany.ORCID http://orcid.org/0000-0002-3083-1126
Georg E WinterCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, 1090, Vienna, Austria. gwinter@cemm.oeaw.ac.at.ORCID http://orcid.org/0000-0001-6606-1437

Funding

Austrian Science Fund (Fonds zur Förderung der Wissenschaftlichen Forschung) P36746Austrian Science Fund (Fonds zur Förderung der Wissenschaftlichen Forschung) P5918723Austrian Science Fund (Fonds zur Förderung der Wissenschaftlichen Forschung) P7909EC | EU Framework Programme for Research and Innovation H2020 | H2020 Priority Excellent Science | H2020 European Research Council (H2020 Excellent Science - European Research Council) 789016EC | EU Framework Programme for Research and Innovation H2020 | H2020 Priority Excellent Science | H2020 European Research Council (H2020 Excellent Science - European Research Council) 851478
6 · The paper itself

Abstract

Targeted protein degradation (TPD) relies on small molecules to recruit proteins to E3 ligases to induce their ubiquitylation and degradation by the proteasome. Only a few of the approximately 600 human E3 ligases are currently amenable to this strategy. This limits the actionable target space and clinical opportunities and thus establishes the necessity to expand to additional ligases. Here we identify and characterize SP3N, a specific degrader of the prolyl isomerase FKBP12. SP3N features a minimal design, where a known FKBP12 ligand is appended with a flexible alkylamine tail that conveys degradation properties. We found that SP3N is a precursor and that the alkylamine is metabolized to an active aldehyde species that recruits the SCF

Indexed as

F-Box ProteinsProteolysisUbiquitinationAminesHEK293 CellsHumansLigandsProteasome Endopeptidase ComplexReceptors, Cytoplasmic and NuclearTacrolimus Binding Protein 1AUbiquitin-Protein LigasesAminesF-Box ProteinsFBXO22 protein, humanLigandsProteasome Endopeptidase ComplexReceptors, Cytoplasmic and NuclearTacrolimus Binding Protein 1AUbiquitin-Protein Ligases

Identifiers

PMID38926334
PMCPMC11208438

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.