Evidence map›Paper›PMID 38924699›Full record

ArticleAnnals of clinical and translational neurology2024

Proteomic networks of gray and white matter reveal tissue-specific changes in human tauopathy.

Ashlyn G Johnson, Eric B Dammer, James A Webster, Duc M Duong, Nicholas T Seyfried, Chadwick M Hales

Abstract read
In one paragraph

Article in Annals of clinical and translational neurology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Ashlyn G JohnsonNeuroscience Graduate Program, Laney Graduate School, Emory University, Atlanta, Georgia, USA.ORCID 0000-0001-6129-8267
Eric B DammerCenter for Neurodegenerative Disease, Emory University School of Medicine, Atlanta, Georgia, USA.
James A WebsterCenter for Neurodegenerative Disease, Emory University School of Medicine, Atlanta, Georgia, USA.
Duc M DuongCenter for Neurodegenerative Disease, Emory University School of Medicine, Atlanta, Georgia, USA.
Nicholas T SeyfriedCenter for Neurodegenerative Disease, Emory University School of Medicine, Atlanta, Georgia, USA.
Chadwick M HalesCenter for Neurodegenerative Disease, Emory University School of Medicine, Atlanta, Georgia, USA.

Funding

Implementing a Maternal health and PRegnancy Outcomes Vision for Everyone (IMPROVE)UL1TR002378 · NCATS · EMORY UNIVERSITY · PI Andres J Garcia, Elizabeth O. Ofili · 2017 to 2026
$92.1M
The Goizueta Alzheimer's Disease Research CenterP30AG066511 · NIA · EMORY UNIVERSITY · PI ALLAN I LEVEY · 2020 to 2026
$29.0M
RL5: Research Education CoreP30AG072978 · NIA · BOSTON UNIVERSITY MEDICAL CAMPUS · PI Ann C. McKee · 2021 to 2026
$25.6M
Training In Systems And Integrative Biology NeuroscienceT32NS096050 · NINDS · EMORY UNIVERSITY · PI Yoland Smith · 2016 to 2026
$3.9M
NCATS NIH HHS UL1 TR002378NIA NIH HHS P30 AG066511NIA NIH HHS P30 AG072978NIH HHS P30AG066511NIH HHS P30AG072978NIH HHS UL1TR002378NINDS NIH HHS T32 NS096050U.S. Department of Defense DoD-PRARP AZ150143
6 · The paper itself

Abstract

objectiveTo define tauopathy-associated changes in the human gray and white matter proteome.

methodWe applied tandem mass tagged labeling and mass spectrometry, consensus, and ratio weighted gene correlation network analysis (WGCNA) to gray and white matter sampled from postmortem human dorsolateral prefrontal cortex. The sampled tissues included control as well as Alzheimer's disease, corticobasal degeneration, progressive supranuclear palsy, frontotemporal degeneration with tau pathology, and chronic traumatic encephalopathy.

resultsOnly eight proteins were unique to gray matter while six were unique to white matter. Comparison of the gray and white matter proteome revealed an enrichment of microglial proteins in the white matter. Consensus WGCNA sorted over 6700 protein isoforms into 46 consensus modules across the gray and white matter proteomic networks. Consensus network modules demonstrated unique and shared disease-associated microglial and endothelial protein changes. Ratio WGCNA sorted over 6500 protein ratios (white:gray) into 33 modules. Modules associated with mitochondrial proteins and processes demonstrated higher white:gray ratios in diseased tissues relative to control, driven by mitochondrial protein downregulation in gray and upregulation in white.

interpretationThe dataset is a valuable resource for understanding proteomic changes in human tauopathy gray and white matter. The identification of unique and shared disease-associated changes across gray and white matter emphasizes the utility of examining both tissue types. Future studies of microglial, endothelial, and mitochondrial changes in white matter may provide novel insights into tauopathy-associated changes in human brain.

Indexed as

Gray MatterProteomicsTauopathiesWhite MatterAgedAged, 80 and overAlzheimer DiseaseFemaleHumansMaleMiddle AgedPrefrontal CortexProteomeSupranuclear Palsy, ProgressiveProteome

Identifiers

PMID38924699
PMCPMC11330236

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.