Evidence map›Paper›PMID 38923940›Full record

ArticleThe Plant cell2024

Bioengineering secreted proteases converts divergent Rcr3 orthologs and paralogs into extracellular immune co-receptors.

Jiorgos Kourelis, Mariana Schuster, Fatih Demir, Oliver Mattinson, Sonja Krauter, Parvinderdeep S Kahlon, Ruby O'Grady, Samantha Royston, Ana Lucía Bravo-Cazar, Brian C Mooney and 3 more

Abstract read
In one paragraph

Article in The Plant cell, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
  4. Review
  5. Oxygen sensing and plant adaptation to flooding in a changing climate.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
    Review
  6. Review
  7. Plants (Basel, Switzerland) · 2024
    Article
  8. Focus on proteolysis.The Plant cell · 2024
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Jiorgos KourelisThe Plant Chemetics Laboratory, Department of Biology, University of Oxford, South Parks Road, OX1 3RB Oxford, UK.ORCID 0000-0002-9007-1333
Mariana SchusterThe Plant Chemetics Laboratory, Department of Biology, University of Oxford, South Parks Road, OX1 3RB Oxford, UK.ORCID 0000-0002-3836-0242
Fatih DemirCentral Institute for Engineering, Department of Electronics and Analytics (ZEA), Analytics (ZEA-3), Research Centre Jülich, Wilhelm-Johnen-Str., 52428 Jülich, Germany.ORCID 0000-0002-5744-0205
Oliver MattinsonThe Plant Chemetics Laboratory, Department of Biology, University of Oxford, South Parks Road, OX1 3RB Oxford, UK.ORCID 0000-0001-8374-0837
Sonja KrauterThe Plant Chemetics Laboratory, Department of Biology, University of Oxford, South Parks Road, OX1 3RB Oxford, UK.ORCID 0009-0005-0299-4701
Parvinderdeep S KahlonThe Plant Chemetics Laboratory, Department of Biology, University of Oxford, South Parks Road, OX1 3RB Oxford, UK.ORCID 0000-0003-0113-0539
Ruby O'GradyThe Plant Chemetics Laboratory, Department of Biology, University of Oxford, South Parks Road, OX1 3RB Oxford, UK.ORCID 0000-0003-4772-6098
Samantha RoystonThe Plant Chemetics Laboratory, Department of Biology, University of Oxford, South Parks Road, OX1 3RB Oxford, UK.
Ana Lucía Bravo-CazarThe Plant Chemetics Laboratory, Department of Biology, University of Oxford, South Parks Road, OX1 3RB Oxford, UK.ORCID 0009-0006-9049-2206
Brian C MooneyThe Plant Chemetics Laboratory, Department of Biology, University of Oxford, South Parks Road, OX1 3RB Oxford, UK.
Pitter F HuesgenCentral Institute for Engineering, Department of Electronics and Analytics (ZEA), Analytics (ZEA-3), Research Centre Jülich, Wilhelm-Johnen-Str., 52428 Jülich, Germany.ORCID 0000-0002-0335-2242
Sophien KamounThe Sainsbury Laboratory, Norwich Research Park, NR4 7UH, Norwich, UK.ORCID 0000-0002-0290-0315
Renier A L van der HoornThe Plant Chemetics Laboratory, Department of Biology, University of Oxford, South Parks Road, OX1 3RB Oxford, UK.ORCID 0000-0002-3692-7487

Funding

ExtraImmune BB/S003193/1GreenProteases ERC-AdG-2020The Clarendon Fund ERC-CoG-2013
6 · The paper itself

Abstract

Secreted immune proteases "Required for Cladosporium resistance-3" (Rcr3) and "Phytophthora-inhibited protease-1" (Pip1) of tomato (Solanum lycopersicum) are both inhibited by Avirulence-2 (Avr2) from the fungal plant pathogen Cladosporium fulvum. However, only Rcr3 acts as a decoy co-receptor that detects Avr2 in the presence of the Cf-2 immune receptor. Here, we identified crucial residues in tomato Rcr3 that are required for Cf-2-mediated signaling and bioengineered various proteases to trigger Avr2/Cf-2-dependent immunity. Despite substantial divergence in Rcr3 orthologs from eggplant (Solanum melongena) and tobacco (Nicotiana spp.), minimal alterations were sufficient to trigger Avr2/Cf-2-mediated immune signaling. By contrast, tomato Pip1 was bioengineered with 16 Rcr3-specific residues to initiate Avr2/Cf-2-triggered immune signaling. These residues cluster on one side of the protein next to the substrate-binding groove, indicating a potential Cf-2 interaction site. Our findings also revealed that Rcr3 and Pip1 have distinct substrate preferences determined by two variant residues and that both are suboptimal for binding Avr2. This study advances our understanding of Avr2 perception and opens avenues to bioengineer proteases to broaden pathogen recognition in other crops.

Indexed as

CladosporiumPeptide HydrolasesPlant ProteinsSolanum lycopersicumBioengineeringFungal ProteinsNicotianaPlant DiseasesPlant ImmunitySignal TransductionFungal ProteinsPeptide HydrolasesPlant Proteins

Identifiers

PMID38923940
PMCPMC11371160

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.