Evidence map›Paper›PMID 38923724›Full record

ArticleThe plant genome2024

Q&A: Methods for estimating genetic gain in sub-Saharan Africa and achieving improved gains.

Ibnou Dieng, Brian Gardunia, Giovanny Covarrubias-Pazaran, Dorcus C Gemenet, Bodo Trognitz, Sam Ofodile, Kayode Fowobaje, Solomon Ntukidem, Trushar Shah, Simon Imoro and 5 more

Abstract read
In one paragraph

Article in The plant genome, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Ibnou DiengInternational Institute of Tropical Agriculture (IITA), Ibadan, Nigeria.ORCID https://orcid.org/0000-0002-1051-9143
Brian GarduniaBayer Crop Science, Chesterfield, Missouri, USA.ORCID https://orcid.org/0009-0003-5312-6010
Giovanny Covarrubias-PazaranExcellence in Breeding (EiB) c/o International Maize and Wheat improvement Center (CIMMYT), Texcoco, Mexico.ORCID https://orcid.org/0000-0002-7194-3837
Dorcus C GemenetEiB-CIMMYT c/o ICRAF House United Nations Avenue, Nairobi, Kenya.ORCID https://orcid.org/0000-0003-4901-1694
Bodo TrognitzEiB-CIMMYT c/o IITA, Ibadan, Nigeria.ORCID https://orcid.org/0000-0002-8894-8968
Sam OfodileInternational Institute of Tropical Agriculture (IITA), Ibadan, Nigeria.ORCID https://orcid.org/0000-0002-9576-2440
Kayode FowobajeInternational Institute of Tropical Agriculture (IITA), Ibadan, Nigeria.ORCID https://orcid.org/0000-0002-3995-160X
Solomon NtukidemInternational Institute of Tropical Agriculture (IITA), Ibadan, Nigeria.ORCID https://orcid.org/0000-0001-5301-8296
Trushar ShahIITA c/o International Livestock Research Institute (ILRI), Nairobi, Kenya.ORCID https://orcid.org/0000-0002-0091-7981
Simon ImoroInternational Institute of Tropical Agriculture (IITA), Ibadan, Nigeria.ORCID https://orcid.org/0000-0002-3504-9109
Leena TripathiIITA c/o International Livestock Research Institute (ILRI), Nairobi, Kenya.ORCID https://orcid.org/0000-0001-5723-4981
Hapson MushoriwaInternational Institute of Tropical Agriculture (IITA), Ibadan, Nigeria.ORCID https://orcid.org/0000-0001-8772-2409
Ruth MbabaziBayer Crop Science, Chesterfield, Missouri, USA.ORCID https://orcid.org/0000-0003-0854-9324
Stella SalvoBayer Crop Science, Chesterfield, Missouri, USA.ORCID https://orcid.org/0009-0008-1477-0184
John DereraInternational Institute of Tropical Agriculture (IITA), Ibadan, Nigeria.ORCID https://orcid.org/0000-0003-3715-0689

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Regular measurement of realized genetic gain allows plant breeders to assess and review the effectiveness of their strategies, allocate resources efficiently, and make informed decisions throughout the breeding process. Realized genetic gain estimation requires separating genetic trends from nongenetic trends using the linear mixed model (LMM) on historical multi-environment trial data. The LMM, accounting for the year effect, experimental designs, and heterogeneous residual variances, estimates best linear unbiased estimators of genotypes and regresses them on their years of origin. An illustrative example of estimating realized genetic gain was provided by analyzing historical data on fresh cassava (Manihot esculenta Crantz) yield in West Africa (https://github.com/Biometrics-IITA/Estimating-Realized-Genetic-Gain). This approach can serve as a model applicable to other crops and regions. Modernization of breeding programs is necessary to maximize the rate of genetic gain. This can be achieved by adopting genomics to enable faster breeding, accurate selection, and improved traits through genomic selection and gene editing. Tracking operational costs, establishing robust, digitalized data management and analytics systems, and developing effective varietal selection processes based on customer insights are also crucial for success. Capacity building and collaboration of breeding programs and institutions also play a significant role in accelerating genetic gains.

Indexed as

ManihotPlant BreedingAfrica South of the SaharaCrops, AgriculturalGenotypeModels, Genetic

Identifiers

PMID38923724
PMCPMC12806978

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.