Evidence map›Paper›PMID 38923307›Full record

ArticleInfluenza and other respiratory viruses2024

Monitoring Influenza C and D Viruses in Patients With Respiratory Diseases in Japan, January 2018 to March 2023.

Kohei Shimizu, Chiharu Kawakami, Yoko Matsuzaki, Seiichiro Fujisaki, Shiho Nagata, Hiroko Morita, Kayo Watanabe, Hideka Miura, Tomoko Momoki, Miwako Saikusa and 10 more

Abstract read
In one paragraph

Article in Influenza and other respiratory viruses, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Baloxavir susceptibility of seasonal influenza viruses during the first seven seasons of clinical use in Japan, 2017/18 to 2023/24.Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors.

Kohei ShimizuYokohama City Institute of Public Health, Yokohama, Kanagawa, Japan.
Chiharu KawakamiYokohama City Institute of Public Health, Yokohama, Kanagawa, Japan.
Yoko MatsuzakiDepartment of Infectious Diseases, Yamagata University Faculty of Medicine, Yamagata, Japan.
Seiichiro FujisakiResearch Center for Influenza and Respiratory Viruses, National Institute of Infectious Diseases, Tokyo, Japan.
Shiho NagataResearch Center for Influenza and Respiratory Viruses, National Institute of Infectious Diseases, Tokyo, Japan.
Hiroko MoritaResearch Center for Influenza and Respiratory Viruses, National Institute of Infectious Diseases, Tokyo, Japan.
Kayo WatanabeResearch Center for Influenza and Respiratory Viruses, National Institute of Infectious Diseases, Tokyo, Japan.
Hideka MiuraResearch Center for Influenza and Respiratory Viruses, National Institute of Infectious Diseases, Tokyo, Japan.
Tomoko MomokiYokohama City Institute of Public Health, Yokohama, Kanagawa, Japan.
Miwako SaikusaYokohama City Institute of Public Health, Yokohama, Kanagawa, Japan.
Hiroki OzawaYokohama City Institute of Public Health, Yokohama, Kanagawa, Japan.
Makoto KumazakiYokohama City Institute of Public Health, Yokohama, Kanagawa, Japan.
Shuzo UsukuYokohama City Institute of Public Health, Yokohama, Kanagawa, Japan.
Nobuko TanakaYokohama City Institute of Public Health, Yokohama, Kanagawa, Japan.
Ryuichi SendaYokohama City Institute of Public Health, Yokohama, Kanagawa, Japan.
Ichiro OkuboYokohama City Institute of Public Health, Yokohama, Kanagawa, Japan.
Shinji WatanabeResearch Center for Influenza and Respiratory Viruses, National Institute of Infectious Diseases, Tokyo, Japan.
Hideki HasegawaResearch Center for Influenza and Respiratory Viruses, National Institute of Infectious Diseases, Tokyo, Japan.
Yoshihiro KawaokaPandemic Preparedness, Infection, and Advanced Research Center, The University of Tokyo, Tokyo, Japan.
Emi TakashitaResearch Center for Influenza and Respiratory Viruses, National Institute of Infectious Diseases, Tokyo, Japan.ORCID 0000-0002-9064-4699

Funding

Japan Agency for Medical Research and Development JP233fa627001Japan Society for the Promotion of Science JP18K10036Ministry of Health, Labour and Welfare 21HA2003
6 · The paper itself

Abstract

backgroundInfluenza viruses can cause zoonotic infections that pose public health risks. Surveillance of influenza A and B viruses is conducted globally; however, information on influenza C and D viruses is limited. Longitudinal monitoring of influenza C virus in humans has been conducted in several countries, but there has been no long-term monitoring of influenza D virus in humans. The public health risks associated with the influenza D virus therefore remain unknown.

methodsWe established a duplex real-time RT-PCR to detect influenza C and D viruses and analyzed respiratory specimens collected from 2144 patients in Japan with respiratory diseases between January 2018 and March 2023. We isolated viruses and conducted hemagglutination inhibition tests to examine antigenicity and focus reduction assays to determine susceptibility to the cap-dependent endonuclease inhibitor baloxavir marboxil.

resultsWe detected three influenza C viruses belonging to the C/Kanagawa- or C/Sao Paulo-lineages, which recently circulated globally. None of the specimens was positive for the influenza D virus. The C/Yokohama/1/2022 strain, isolated from the specimen with the highest viral RNA load and belonging to the C/Kanagawa-lineage, showed similar antigenicity to the reference C/Kanagawa-lineage strain and was susceptible to baloxavir.

conclusionsOur duplex real-time RT-PCR is useful for the simultaneous detection of influenza C and D viruses from the same specimen. Adding the influenza D virus to the monitoring of the influenza C virus would help in assessing the public health risks posed by this virus.

Indexed as

DibenzothiepinsGammainfluenzavirusInfluenza, HumanPyridonesTriazinesAdolescentAdultAgedAged, 80 and overAntiviral AgentsChildChild, PreschoolFemaleHemagglutination Inhibition TestsHumansInfantAntiviral AgentsbaloxavirDibenzothiepinsMorpholinesPyridonesTriazinesinfluenza Cinfluenza Dsurveillancezoonotic infection

Identifiers

PMID38923307
PMCPMC11196370

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.