Evidence map›Paper›PMID 38922563›Full record

ArticleVirus genes2024

Characterization of an envelope protein 118L in invertebrate iridescent virus 6 (IIV6).

Betul Altun, Kubra Zengin, Sevde Yayli Dabag, Aydin Yesilyurt, Remziye Nalcacioglu, Zihni Demirbag

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Article in Virus genes, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Betul AltunDepartment of Molecular Biology and Genetic, Faculty of Sciences, Karadeniz Technical University, 61080, Trabzon, Turkey.
Kubra ZenginDepartment of Biology, Faculty of Sciences, Karadeniz Technical University, 61080, Trabzon, Turkey.
Sevde Yayli DabagDepartment of Biology, Faculty of Sciences, Karadeniz Technical University, 61080, Trabzon, Turkey.
Aydin YesilyurtTonya Vocational School, Trabzon University, Trabzon, Turkey.
Remziye NalcaciogluDepartment of Biology, Faculty of Sciences, Karadeniz Technical University, 61080, Trabzon, Turkey.ORCID http://orcid.org/0000-0003-0527-9541
Zihni DemirbagDepartment of Biology, Faculty of Sciences, Karadeniz Technical University, 61080, Trabzon, Turkey. zihni@ktu.edu.tr.ORCID http://orcid.org/0000-0001-5487-1977

Funding

The Scientific and Technological Research Council of Turkey 119Z209
6 · The paper itself

Abstract

Invertebrate iridescent virus 6 (IIV6) is a nucleocytoplasmic insect virus and a member of the family Iridoviridae. The IIV6 genome consists of 212,482 bp of linear dsDNA with 215 non-overlapping and putative protein-encoding ORFs. The IIV6 118L ORF is conserved in all sequenced members of the Iridoviridae and encodes a 515 amino acid protein with three predicted transmembrane domains and several N-glycosylation/N-myristoylation sites. In this study, we characterized the 118L ORF by both deleting it from the viral genome and silencing its expression with dsRNA in infected insect cells. The homologous recombination method was used to replace 118L ORF with the green fluorescent protein (gfp) gene. Virus mutants in which the 118L gene sequence had been replaced with gfp were identified by fluorescence microscopy but could not be propagated separately from the wild-type virus in insect cells. Unsuccessful attempts to isolate the mutant virus with the 118L gene deletion suggested that the protein is essential for virus replication. To support this result, we used dsRNA to target the 118L gene and showed that treatment resulted in a 99% reduction in virus titer. Subsequently, we demonstrated that 118L-specific antibodies produced against the 118L protein expressed in the baculovirus vector system were able to neutralize the virus infection. All these results indicate that 118L is a viral envelope protein that is required for the initiation of virus replication.

Indexed as

Viral Envelope ProteinsAnimalsCell LineGenome, ViralIridovirusOpen Reading FramesSf9 CellsSpodopteraVirus ReplicationViral Envelope ProteinsdsRNAIridoviridaeReplicationViral membrane protein

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.