Evidence map›Paper›PMID 38919267›Full record

ArticleFrontiers in artificial intelligence2024

Predicting overall survival from tumor dynamics metrics using parametric statistical and machine learning models: application to patients with

Erick Velasquez, Nastya Kassir, Sravanthi Cheeti, Denison Kuruvilla, Rucha Sane, Steve Dang, Dale Miles, James Lu

Abstract read
In one paragraph

Article in Frontiers in artificial intelligence, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Erick Velasquez *Clinical Pharmacology, Genentech Inc., South San Francisco, CA, United States.
Nastya KassirClinical Pharmacology, Genentech Inc., South San Francisco, CA, United States.
Sravanthi CheetiClinical Pharmacology, Genentech Inc., South San Francisco, CA, United States.
Denison KuruvillaClinical Pharmacology, Genentech Inc., South San Francisco, CA, United States.
Rucha SaneClinical Pharmacology, Genentech Inc., South San Francisco, CA, United States.
Steve DangClinical Pharmacology, Genentech Inc., South San Francisco, CA, United States.
Dale MilesClinical Pharmacology, Genentech Inc., South San Francisco, CA, United States.
James Lu *Clinical Pharmacology, Genentech Inc., South San Francisco, CA, United States.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In oncology drug development, tumor dynamics modeling is widely applied to predict patients' overall survival (OS) via parametric models. However, the current modeling paradigm, which assumes a disease-specific link between tumor dynamics and survival, has its limitations. This is particularly evident in drug development scenarios where the clinical trial under consideration contains patients with tumor types for which there is little to no prior institutional data. In this work, we propose the use of a pan-indication solid tumor machine learning (ML) approach whereby all three tumor metrics (tumor shrinkage rate, tumor regrowth rate and time to tumor growth) are simultaneously used to predict patients' OS in a tumor type independent manner. We demonstrate the utility of this approach in a clinical trial of cancer patients treated with the tyrosine kinase inhibitor, pralsetinib. We compared the parametric and ML models and the results showed that the proposed ML approach is able to adequately predict patient OS across

Indexed as

machine learningoncologypharmacometricsstatistical modelingsurvival prediction

Identifiers

PMID38919267
PMCPMC11196751

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.