Evidence map›Paper›PMID 38918367›Full record

ArticleNature communications2024

Production of constrained L-cyclo-tetrapeptides by epimerization-resistant direct aminolysis.

Huan Chen, Yuchen Zhang, Yuming Wen, Xinhao Fan, Nicholas Sciolino, Yanyun Lin, Leonard Breindel, Yuanwei Dai, Alexander Shekhtman, Xiao-Song Xue and 1 more

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Huan Chen *Department of Chemistry, State University of New York, University at Albany, Albany, NY, 12222, USA.ORCID http://orcid.org/0000-0003-1682-8809
Yuchen Zhang *Key Laboratory of Fluorine and Nitrogen Chemistry and Advanced Materials, Shanghai Institute of Organic Chemistry, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 345 Lingling Road, 200032, Shanghai, China.
Yuming WenDepartment of Chemistry, State University of New York, University at Albany, Albany, NY, 12222, USA.ORCID http://orcid.org/0009-0005-0686-1690
Xinhao FanDepartment of Chemistry, State University of New York, University at Albany, Albany, NY, 12222, USA.
Nicholas SciolinoDepartment of Chemistry, State University of New York, University at Albany, Albany, NY, 12222, USA.ORCID http://orcid.org/0000-0001-5575-6209
Yanyun LinDepartment of Chemistry, State University of New York, University at Albany, Albany, NY, 12222, USA.
Leonard BreindelDepartment of Chemistry, State University of New York, University at Albany, Albany, NY, 12222, USA.
Yuanwei DaiDepartment of Chemistry, State University of New York, University at Albany, Albany, NY, 12222, USA.
Alexander ShekhtmanDepartment of Chemistry, State University of New York, University at Albany, Albany, NY, 12222, USA. ashekhtman@albany.edu.ORCID http://orcid.org/0000-0003-2649-2675
Xiao-Song XueKey Laboratory of Fluorine and Nitrogen Chemistry and Advanced Materials, Shanghai Institute of Organic Chemistry, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 345 Lingling Road, 200032, Shanghai, China. xuexs@sioc.ac.cn.ORCID http://orcid.org/0000-0003-4541-8702
Qiang ZhangDepartment of Chemistry, State University of New York, University at Albany, Albany, NY, 12222, USA. qzhang5@albany.edu.ORCID http://orcid.org/0000-0003-2787-1781

Funding

CHEMISTRY OF BIOLOGICAL SYSTEMST32GM008500 · NIGMS · CORNELL UNIVERSITY ITHACA · PI LIN, HENING · 1996 to 2020
$5.4M
Real Time (RT) In-cell NMR technology to study protein interactions in live cellsR01GM085006 · NIGMS · STATE UNIVERSITY OF NEW YORK AT ALBANY · PI SHEKHTMAN, ALEXANDER · 2010 to 2021
$2.4M
The chemical approach towards homogenous glycoprotein preparation and evaluationR35GM138336 · NIGMS · STATE UNIVERSITY OF NEW YORK AT ALBANY · PI Qiang Zhang · 2020 to 2026
$2.2M
National Natural Science Foundation of China (National Science Foundation of China) 21933004National Natural Science Foundation of China (National Science Foundation of China) 22122104NIGMS NIH HHS R01 GM085006NIGMS NIH HHS R35 GM138336U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) GM08500606A1U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) GM138336
6 · The paper itself

Abstract

The synthesis of constrained 12-membered rings is notably difficult. The main challenges result from constraints during the linear peptide cyclization. Attempts to overcome constraints through excessive activation frequently cause peptidyl epimerization, while insufficient activation of the C-terminus hampers cyclization and promotes intermolecular oligomer formation. We present a β-thiolactone framework that enables the synthesis of cyclo-tetrapeptides via direct aminolysis. This tactic utilizes a mechanism that restricts C-terminal carbonyl rotation while maintaining high reactivity, thereby enabling efficient head-to-tail amidation, reducing oligomerization, and preventing epimerization. A broad range of challenging cyclo-tetrapeptides ( > 20 examples) are synthesized in buffer and exhibits excellent tolerance toward nearly all proteinogenic amino acids. Previously unattainable macrocycles, such as cyclo-L-(Pro-Tyr-Pro-Val), have been produced and identified as μ-opioid receptor (MOR) agonists, with an EC

Indexed as

Peptides, CyclicAmino AcidsCyclizationHumansOligopeptidesReceptors, Opioid, muAmino AcidsOligopeptidesPeptides, CyclicReceptors, Opioid, mu

Identifiers

PMID38918367
PMCPMC11199569

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.