Evidence map›Paper›PMID 38916294›Full record

ArticleApplied and environmental microbiology2024

Physiological and transcriptomic response to methyl-coenzyme M reductase limitation in

Grayson L Chadwick, Gavin A Dury, Dipti D Nayak

Abstract read
In one paragraph

Article in Applied and environmental microbiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Methanogenic archaea encoding Pyrrolysine maintain ambiguous amber codon usage.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Grayson L ChadwickDepartment of Molecular and Cell Biology, University of California, Berkeley, California, USA.ORCID 0000-0003-0700-9350
Gavin A DuryDepartment of Molecular and Cell Biology, University of California, Berkeley, California, USA.ORCID 0000-0002-7049-2368
Dipti D NayakDepartment of Molecular and Cell Biology, University of California, Berkeley, California, USA.ORCID 0000-0002-8390-7251

Funding

Adolph C. and Mary Sprague Miller Institute for Basic Research in Science, University of California Berkeley (MIBRS)Arnold and Mabel Beckman Foundation (AMBF) Beckman Young Investigator AwardChan Zuckerberg Initiative (CZI) Chan-Zuckerberg Biohub - San Francisco InvestigatorDavid and Lucile Packard Foundation (PF) Packard Fellowship in Science and EngineeringHHS | National Institutes of Health (NIH) 5T32GM06698-14Searle Scholars Program (SSP)Simons Foundation (SF) Simons Early Career Investigator in Marine Microbial Ecology and Evolution
6 · The paper itself

Abstract

Methyl-coenzyme M reductase (MCR) catalyzes the final step of methanogenesis, the microbial metabolism responsible for nearly all biological methane emissions to the atmosphere. Decades of biochemical and structural research studies have generated detailed insights into MCR function IMPORTANCE: Methane is a potent greenhouse gas that has contributed to ca. 25% of global warming in the post-industrial era. Atmospheric methane is primarily of biogenic origin, mostly produced by microorganisms called methanogens. Methyl-coenzyme M reductase (MCR) catalyzes methane formatio in methanogens. Even though MCR comprises ca. 10% of the cellular proteome, it is hypothesized to be growth-limiting during methanogenesis. In this study, we show that

Indexed as

MethanosarcinaOxidoreductasesTranscriptomeArchaeal ProteinsGene Expression Regulation, ArchaealMethaneOperonArchaeal ProteinsMethanemethyl coenzyme M reductaseOxidoreductasesmethanemethanogenMethanosarcina

Identifiers

PMID38916294
PMCPMC11267899

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.