Evidence map›Paper›PMID 38914653›Full record

ArticleCommunications biology2024

Probing chromatin condensation dynamics in live cells using interferometric scattering correlation spectroscopy.

Yi-Teng Hsiao, I-Hsin Liao, Bo-Kuan Wu, Hsueh-Ping Catherine Chu, Chia-Lung Hsieh

Abstract read
In one paragraph

Article in Communications biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Yi-Teng HsiaoInstitute of Atomic and Molecular Sciences (IAMS), Academia Sinica, Taipei, Taiwan.
I-Hsin LiaoInstitute of Atomic and Molecular Sciences (IAMS), Academia Sinica, Taipei, Taiwan.ORCID 0009-0002-2814-0462
Bo-Kuan WuInstitute of Atomic and Molecular Sciences (IAMS), Academia Sinica, Taipei, Taiwan.
Hsueh-Ping Catherine ChuInstitute of Molecular and Cellular Biology, National Taiwan University, Taipei, Taiwan.ORCID 0000-0002-0281-0942
Chia-Lung HsiehInstitute of Atomic and Molecular Sciences (IAMS), Academia Sinica, Taipei, Taiwan. clh@gate.sinica.edu.tw.ORCID 0000-0002-6757-8689

Funding

Academia Sinica AS-GCS-113-M03Academia Sinica AS-iMATE-111-35
6 · The paper itself

Abstract

Chromatin organization and dynamics play important roles in governing the regulation of nuclear processes of biological cells. However, due to the constant diffusive motion of chromatin, examining chromatin nanostructures in living cells has been challenging. In this study, we introduce interferometric scattering correlation spectroscopy (iSCORS) to spatially map nanoscopic chromatin configurations within unlabeled live cell nuclei. This label-free technique captures time-varying linear scattering signals generated by the motion of native chromatin on a millisecond timescale, allowing us to deduce chromatin condensation states. Using iSCORS imaging, we quantitatively examine chromatin dynamics over extended periods, revealing spontaneous fluctuations in chromatin condensation and heterogeneous compaction levels in interphase cells, independent of cell phases. Moreover, we observe changes in iSCORS signals of chromatin upon transcription inhibition, indicating that iSCORS can probe nanoscopic chromatin structures and dynamics associated with transcriptional activities. Our scattering-based optical microscopy, which does not require labeling, serves as a powerful tool for visualizing dynamic chromatin nano-arrangements in live cells. This advancement holds promise for studying chromatin remodeling in various crucial cellular processes, such as stem cell differentiation, mechanotransduction, and DNA repair.

Indexed as

ChromatinCell NucleusChromatin Assembly and DisassemblyHumansInterferometrySpectrum AnalysisChromatin

Identifiers

PMID38914653
PMCPMC11196589

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.