Evidence map›Paper›PMID 38914564›Full record

ArticleNature communications2024

Improving the representativeness of UK's national COVID-19 Infection Survey through spatio-temporal regression and post-stratification.

Koen B Pouwels, David W Eyre, Thomas House, Ben Aspey, Philippa C Matthews, Nicole Stoesser, John N Newton, Ian Diamond, Ruth Studley, Nick G H Taylor and 11 more

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Observational
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors.

Koen B PouwelsHealth Economics Research Centre, Nuffield Department of Population Health, University of Oxford, Oxford, UK. koen.pouwels@ndph.ox.ac.uk.ORCID 0000-0001-7097-8950
David W EyreThe National Institute for Health Research Health Protection Research Unit in Healthcare Associated Infections and Antimicrobial Resistance at the University of Oxford, Oxford, UK.ORCID 0000-0001-5095-6367
Thomas HouseDepartment of Mathematics, University of Manchester, Manchester, UK.ORCID 0000-0001-5835-8062
Ben AspeyOffice for National Statistics, Newport, UK.
Philippa C MatthewsThe Francis Crick Institute, London, UK.
Nicole StoesserThe National Institute for Health Research Health Protection Research Unit in Healthcare Associated Infections and Antimicrobial Resistance at the University of Oxford, Oxford, UK.ORCID 0000-0002-4508-7969
John N NewtonEuropean Centre for Environment and Human Health, University of Exeter, Truro, UK.ORCID 0000-0002-5641-6457
Ian DiamondOffice for National Statistics, Newport, UK.
Ruth StudleyOffice for National Statistics, Newport, UK.
Nick G H TaylorOffice for National Statistics, Newport, UK.
John I BellOffice of the Regius Professor of Medicine, University of Oxford, Oxford, UK.
Jeremy FarrarWellcome Trust, London, UK.
Jaison KolencheryDepartment of Infectious Diseases and Microbiology, Oxford University Hospitals NHS Foundation Trust, John Radcliffe Hospital, Oxford, UK.
Brian D MarsdenNuffield Department of Medicine, University of Oxford, Oxford, UK.ORCID 0000-0002-1937-4091
Sarah HoosdallyNuffield Department of Medicine, University of Oxford, Oxford, UK.
E Yvonne JonesNuffield Department of Medicine, University of Oxford, Oxford, UK.ORCID 0000-0002-3834-1893
David I StuartNuffield Department of Medicine, University of Oxford, Oxford, UK.
Derrick W CrookThe National Institute for Health Research Health Protection Research Unit in Healthcare Associated Infections and Antimicrobial Resistance at the University of Oxford, Oxford, UK.
Tim E A PetoThe National Institute for Health Research Health Protection Research Unit in Healthcare Associated Infections and Antimicrobial Resistance at the University of Oxford, Oxford, UK.
A Sarah WalkerThe National Institute for Health Research Health Protection Research Unit in Healthcare Associated Infections and Antimicrobial Resistance at the University of Oxford, Oxford, UK.
COVID−19 Infection Survey Team

Funding

Medical Research Council MC_UU_12023/22Wellcome Trust
6 · The paper itself

Abstract

Population-representative estimates of SARS-CoV-2 infection prevalence and antibody levels in specific geographic areas at different time points are needed to optimise policy responses. However, even population-wide surveys are potentially impacted by biases arising from differences in participation rates across key groups. Here, we used spatio-temporal regression and post-stratification models to UK's national COVID-19 Infection Survey (CIS) to obtain representative estimates of PCR positivity (6,496,052 tests) and antibody prevalence (1,941,333 tests) for different regions, ages and ethnicities (7-December-2020 to 4-May-2022). Not accounting for vaccination status through post-stratification led to small underestimation of PCR positivity, but more substantial overestimations of antibody levels in the population (up to 21 percentage points), particularly in groups with low vaccine uptake in the general population. There was marked variation in the relative contribution of different areas and age-groups to each wave. Future analyses of infectious disease surveys should take into account major drivers of outcomes of interest that may also influence participation, with vaccination being an important factor to consider.

Indexed as

COVID-19SARS-CoV-2AdolescentAdultAgedAged, 80 and overAntibodies, ViralChildChild, PreschoolCOVID-19 VaccinesFemaleHumansInfantMaleMiddle AgedPrevalenceAntibodies, ViralCOVID-19 Vaccines

Identifiers

PMID38914564
PMCPMC11196632

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.