Evidence map›Paper›PMID 38912126›Full record

ArticleApplications in plant sciences

Capturing and managing genetic diversity in ex situ collections of threatened tropical trees: A case study in

Alexander G Linan, Roy E Gereau, Rebecca Sucher, Fandey H Mashimba, Burgund Bassuner, Andrew Wyatt, Christine E Edwards

Abstract read
In one paragraph

Article in Applications in plant sciences. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Alexander G LinanMissouri Botanical Garden 4344 Shaw Blvd. St. Louis 63110 Missouri USA.ORCID 0000-0002-8281-1346
Roy E GereauMissouri Botanical Garden 4344 Shaw Blvd. St. Louis 63110 Missouri USA.
Rebecca SucherMissouri Botanical Garden 4344 Shaw Blvd. St. Louis 63110 Missouri USA.
Fandey H MashimbaTanzania Forest Service Agency, Directorate of Tree Seed Production Box 40832, Nyerere Road, Mpingo House Dar es Salaam Tanzania.
Burgund BassunerMissouri Botanical Garden 4344 Shaw Blvd. St. Louis 63110 Missouri USA.
Andrew WyattMissouri Botanical Garden 4344 Shaw Blvd. St. Louis 63110 Missouri USA.
Christine E EdwardsMissouri Botanical Garden 4344 Shaw Blvd. St. Louis 63110 Missouri USA.ORCID 0000-0001-8837-4872

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Premise: Although ex situ collections of threatened plants are most useful when they contain maximal genetic variation, the conservation and maintenance of genetic diversity in collections are often poorly known. We present a case study using population genomic analyses of an ex situ collection of Methods: We genotyped all known individuals using a 2b-RADseq approach, compared genetic diversity in wild populations and ex situ collections, and conducted parentage analysis of the collections. Results: Wild populations were found to have greater levels of genetic diversity than ex situ populations as measured by number of private alleles, number of polymorphic sites, observed and expected heterozygosity, nucleotide diversity, and allelic richness. In addition, only 32.6% of wild individuals are represented ex situ and many individuals were found to be the product of selfing by a single wild individual. Discussion: Population genomic analyses provided important insights into the conservation of genetic diversity in

Indexed as

botanic gardenconservation geneticsex situgenetic diversityKaromiaparentage analysisTanzania

Identifiers

PMID38912126
PMCPMC11192163

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.