Evidence map›Paper›PMID 38910245›Full record

ArticleBMC plant biology2024

Genome-wide association study, combined with bulk segregant analysis, identify plant receptors and defense related genes as candidate genes for downy mildew resistance in quinoa.

Sara Fondevilla, Álvaro Calderón-González, Borja Rojas-Panadero, Verónica Cruz, Javier Matías

Abstract read
In one paragraph

Article in BMC plant biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

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0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Article
  3. Unraveling Quinoa (Plants (Basel, Switzerland) · 2024
    Article
  4. Article
4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Sara FondevillaInstitute for Sustainable Agriculture, Consejo Superior de Investigaciones Científicas (CSIC), Avd. Menéndez Pidal s/n, Córdoba, 14004, Spain. sfondevilla@ias.csic.es.
Álvaro Calderón-GonzálezInstitute for Sustainable Agriculture, Consejo Superior de Investigaciones Científicas (CSIC), Avd. Menéndez Pidal s/n, Córdoba, 14004, Spain.
Borja Rojas-PanaderoInstitute for Sustainable Agriculture, Consejo Superior de Investigaciones Científicas (CSIC), Avd. Menéndez Pidal s/n, Córdoba, 14004, Spain.
Verónica CruzAgrarian Research Institute "La Orden-Valdesequera" of Extremadura, Centro de Investigaciones Científicas y Tecnológicas de Extremadura (CICYTEX), Autovía A-5, km 372 - 06187, Guadajira, Badajoz, 06187, Spain.
Javier MatíasAgrarian Research Institute "La Orden-Valdesequera" of Extremadura, Centro de Investigaciones Científicas y Tecnológicas de Extremadura (CICYTEX), Autovía A-5, km 372 - 06187, Guadajira, Badajoz, 06187, Spain.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundDowny mildew is the most relevant disease of quinoa and the most widespread. Though, little is known about the genetics of resistance to this disease. The objective of this study was to identify the genomic regions controlling downy mildew resistance in quinoa and candidate genes for this trait. With this aim we carried out a GWAS analysis in a collection formed by 211 quinoa accessions from different origins. This approach was combined with inheritance studies and Bulk Segregant Analysis (BSA) in a segregating population.

resultsGWAS analysis identified 26 genomic regions associated with the trait. Inheritance studies in a F

conclusionsUntil now, little was known about the genetic control of downy mildew resistance in quinoa. A previous inheritance study suggested that resistance to this disease was a quantitative polygenic trait and previous GWAS analyses were unable to identify accurate markers for this disease. In our study we demonstrate the existence of, at least, one major gene conferring resistance to this disease, identify the genomic regions involved in the trait and provide plausible candidate genes involved in defense. Therefore, this study significantly increases our knowledge about the genetics of downy mildew resistance and provides relevant information for breeding for this important trait.

Indexed as

Chenopodium quinoaDisease ResistanceGenes, PlantGenome-Wide Association StudyPlant DiseasesChenopodium quinoaGenetic resistanceGWASPeronospora variabilis

Identifiers

PMID38910245
PMCPMC11194881

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.