Evidence map›Paper›PMID 38902234›Full record

ArticleNature communications2024

Gliovascular transcriptional perturbations in Alzheimer's disease reveal molecular mechanisms of blood brain barrier dysfunction.

Özkan İş, Xue Wang, Joseph S Reddy, Yuhao Min, Elanur Yilmaz, Prabesh Bhattarai, Tulsi Patel, Jeremiah Bergman, Zachary Quicksall, Michael G Heckman and 31 more

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 1 synthesis or guideline pooled it.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

41 authors.

Özkan İş *Department of Neuroscience, Mayo Clinic, Jacksonville, FL, USA.ORCID http://orcid.org/0000-0003-4070-6756
Xue Wang *Department of Quantitative Health Sciences, Mayo Clinic, Jacksonville, FL, USA.ORCID http://orcid.org/0000-0003-1964-4124
Joseph S ReddyDepartment of Quantitative Health Sciences, Mayo Clinic, Jacksonville, FL, USA.ORCID http://orcid.org/0000-0002-1783-4453
Yuhao MinDepartment of Neuroscience, Mayo Clinic, Jacksonville, FL, USA.ORCID http://orcid.org/0000-0001-8775-8743
Elanur YilmazDepartment of Neurology, Columbia University Irving Medical Center, New York, NY, USA.ORCID http://orcid.org/0000-0001-7045-5068
Prabesh BhattaraiDepartment of Neurology, Columbia University Irving Medical Center, New York, NY, USA.ORCID http://orcid.org/0000-0003-2991-5514
Tulsi PatelDepartment of Neuroscience, Mayo Clinic, Jacksonville, FL, USA.
Jeremiah BergmanDepartment of Neuroscience, Mayo Clinic, Jacksonville, FL, USA.
Zachary QuicksallDepartment of Quantitative Health Sciences, Mayo Clinic, Jacksonville, FL, USA.ORCID http://orcid.org/0000-0002-8791-0925
Michael G HeckmanDepartment of Quantitative Health Sciences, Mayo Clinic, Jacksonville, FL, USA.
Frederick Q Tutor-NewDepartment of Neuroscience, Mayo Clinic, Jacksonville, FL, USA.
Birsen Can DemirdogenDepartment of Neuroscience, Mayo Clinic, Jacksonville, FL, USA.ORCID http://orcid.org/0000-0002-1536-6123
Launia WhiteDepartment of Quantitative Health Sciences, Mayo Clinic, Jacksonville, FL, USA.
Shunsuke KogaDepartment of Neuroscience, Mayo Clinic, Jacksonville, FL, USA.ORCID http://orcid.org/0000-0001-8868-9700
Vincent KrauseDepartment of Neuroscience, Mayo Clinic, Jacksonville, FL, USA.
Yasuteru InoueDepartment of Neuroscience, Mayo Clinic, Jacksonville, FL, USA.
Takahisa KanekiyoDepartment of Neuroscience, Mayo Clinic, Jacksonville, FL, USA.ORCID http://orcid.org/0000-0001-6751-9374
Mehmet Ilyas CosacakGerman Center for Neurodegenerative Diseases (DZNE) within Helmholtz Association, Dresden, Germany.ORCID http://orcid.org/0000-0003-2978-3902
Nastasia NelsonDepartment of Neurology, Columbia University Irving Medical Center, New York, NY, USA.
Annie J LeeDepartment of Neurology, Columbia University Irving Medical Center, New York, NY, USA.
Badri VardarajanDepartment of Neurology, Columbia University Irving Medical Center, New York, NY, USA.ORCID http://orcid.org/0000-0002-5560-4085
Richard MayeuxDepartment of Neurology, Columbia University Irving Medical Center, New York, NY, USA.
Naomi KouriDepartment of Neuroscience, Mayo Clinic, Jacksonville, FL, USA.ORCID http://orcid.org/0000-0002-6841-9882
Kaancan DenizDepartment of Neuroscience, Mayo Clinic, Jacksonville, FL, USA.ORCID http://orcid.org/0000-0002-5496-0598
Troy CarnwathDepartment of Neuroscience, Mayo Clinic, Jacksonville, FL, USA.
Stephanie R OatmanDepartment of Neuroscience, Mayo Clinic, Jacksonville, FL, USA.
Laura J Lewis-TuffinMayo Clinic Florida Cytometry and Cell Imaging Laboratory, Mayo Clinic, Jacksonville, FL, USA.ORCID http://orcid.org/0000-0002-6013-8322
Thuy NguyenDepartment of Neuroscience, Mayo Clinic, Jacksonville, FL, USA.ORCID http://orcid.org/0000-0001-8879-7090
Alzheimer’s Disease Neuroimaging Initiative
Minerva M CarrasquilloDepartment of Neuroscience, Mayo Clinic, Jacksonville, FL, USA.ORCID http://orcid.org/0000-0002-3231-9134
Jonathan Graff-RadfordDepartment of Neurology, Mayo Clinic, Rochester, MN, USA.
Ronald C PetersenDepartment of Neurology, Mayo Clinic, Rochester, MN, USA.ORCID http://orcid.org/0000-0002-8178-6601
Clifford R Jr JackMayo Clinic, Radiology, Rochester, MN, USA.ORCID http://orcid.org/0000-0001-7916-622X
Kejal KantarciMayo Clinic Alzheimer's Disease Research Center, Rochester, MN, USA.
Melissa E MurrayDepartment of Neuroscience, Mayo Clinic, Jacksonville, FL, USA.ORCID http://orcid.org/0000-0001-7379-2545
Kwangsik NhoCenter for Computational Biology and Bioinformatics, Indiana University School of Medicine, Indianapolis, IN, USA.
Andrew J SaykinDepartment of Radiology and Imaging Sciences, Indiana University School of Medicine, Indianapolis, IN, USA.ORCID http://orcid.org/0000-0002-1376-8532
Dennis W DicksonDepartment of Neuroscience, Mayo Clinic, Jacksonville, FL, USA.ORCID http://orcid.org/0000-0001-7189-7917
Caghan KizilDepartment of Neurology, Columbia University Irving Medical Center, New York, NY, USA.ORCID http://orcid.org/0000-0002-8164-9762
Mariet AllenDepartment of Neuroscience, Mayo Clinic, Jacksonville, FL, USA.ORCID http://orcid.org/0000-0002-2685-427X
Nilüfer Ertekin-TanerDepartment of Neuroscience, Mayo Clinic, Jacksonville, FL, USA. taner.nilufer@mayo.edu.ORCID http://orcid.org/0000-0003-4436-8889

Funding

Project 1U19AG024904 · NIA · NORTHERN CALIFORNIA INSTITUTE/RES/EDU · PI MONICA G. RIVERA-MINDT · 2016 to 2026
$226.7M
The Health & Aging Brain Study - Health Disparities (HABS-HD)U19AG078109 · NIA · UNIVERSITY OF NORTH TEXAS HLTH SCI CTR · PI LEIGH A JOHNSON · 2022 to 2026
$181.1M
Alzheimer's Disease Neuroimaging Initiative - SupplementU01AG024904 · NIA · NORTHERN CALIFORNIA INSTITUTE RES &EDUC · PI WEINER, MICHAEL W · 2004 to 2015
$121.0M
Tumor Biology and Microenvironment ProgramP30CA013696 · NCI · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI Anil K Rustgi · 1985 to 2026
$115.3M
Clinical and Translational Science AwardUL1TR001873 · NCATS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI REILLY, MUREDACH P · 2016 to 2025
$99.0M
Peripheral and Central Biomarkers of Alzheimer's Disease in Diverse CohortsU19AG074879 · NIA · MAYO CLINIC JACKSONVILLE · PI Minerva Maria Carrasquillo, NILUFER ERTEKIN-TANER · 2023 to 2026
$42.0M
Project 4 (Genetic modifiers for APOE-associated Alzheimer's disease pathogenesis)U19AG069701 · NIA · MAYO CLINIC JACKSONVILLE · PI ALISON M GOATE, DAVID M. HOLTZMAN · 2021 to 2026
$42.0M
Research Education ComponentP30AG062677 · NIA · MAYO CLINIC ROCHESTER · PI John Lucas · 2019 to 2026
$33.5M
Research Education CoreP30AG066462 · NIA · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI PHILIP L DE JAGER · 2020 to 2026
$30.1M
Integrating the exposome and methylome to inform brain molecular changes in ADRD across established diverse cohorts.U01AG046139 · NIA · UNIVERSITY OF FLORIDA · PI ERTEKIN-TANER, NILUFER, FUNK, CORY · 2013 to 2022
$24.6M
Research Education ComponentP30AG072976 · NIA · INDIANA UNIVERSITY INDIANAPOLIS · PI ANDREW J SAYKIN · 2021 to 2026
$24.1M
Ultrascale Machine Learning to Empower Discovery in Alzheimers Disease BiobanksU01AG068057 · NIA · UNIVERSITY OF SOUTHERN CALIFORNIA · PI Christos Davatzikos, Heng Huang · 2020 to 2026
$20.7M
Alzheimer's Association ZEN-22-969810NCATS NIH HHS UL1 TR001873NCI NIH HHS P30 CA013696NIA NIH HHS K01 AG084849NIA NIH HHS P30 AG062677NIA NIH HHS P30 AG066462NIA NIH HHS P30 AG072976NIA NIH HHS R01 AG054449NIA NIH HHS R01 AG060477NIA NIH HHS R01 AG061796NIA NIH HHS R01 AG067501NIA NIH HHS R01 AG072474NIA NIH HHS R01 AG075802NIA NIH HHS RF1 AG051504NIA NIH HHS RF1 AG066107NIA NIH HHS U01 AG024904NIA NIH HHS U01 AG046139NIA NIH HHS U01 AG068057NIA NIH HHS U01 AG072177NIA NIH HHS U19 AG024904NIA NIH HHS U19 AG069701NIA NIH HHS U19 AG074879NIA NIH HHS U19 AG078109NIH HHS S10 OD020056NLM NIH HHS R01 LM012535U.S. Department of Health & Human Services | NIH | National Institute on Aging (U.S. National Institute on Aging) R01AG067501U.S. Department of Health & Human Services | NIH | National Institute on Aging (U.S. National Institute on Aging) R01AG072474U.S. Department of Health & Human Services | NIH | National Institute on Aging (U.S. National Institute on Aging) RF1AG066107U.S. Department of Health & Human Services | NIH | National Institute on Aging (U.S. National Institute on Aging) RF AG051504U.S. Department of Health & Human Services | NIH | National Institute on Aging (U.S. National Institute on Aging) U01AG072177
6 · The paper itself

Abstract

To uncover molecular changes underlying blood-brain-barrier dysfunction in Alzheimer's disease, we performed single nucleus RNA sequencing in 24 Alzheimer's disease and control brains and focused on vascular and astrocyte clusters as main cell types of blood-brain-barrier gliovascular-unit. The majority of the vascular transcriptional changes were in pericytes. Of the vascular molecular targets predicted to interact with astrocytic ligands, SMAD3, upregulated in Alzheimer's disease pericytes, has the highest number of ligands including VEGFA, downregulated in Alzheimer's disease astrocytes. We validated these findings with external datasets comprising 4,730 pericyte and 150,664 astrocyte nuclei. Blood SMAD3 levels are associated with Alzheimer's disease-related neuroimaging outcomes. We determined inverse relationships between pericytic SMAD3 and astrocytic VEGFA in human iPSC and zebrafish models. Here, we detect vast transcriptome changes in Alzheimer's disease at the gliovascular-unit, prioritize perturbed pericytic SMAD3-astrocytic VEGFA interactions, and validate these in cross-species models to provide a molecular mechanism of blood-brain-barrier disintegrity in Alzheimer's disease.

Indexed as

Alzheimer DiseaseAstrocytesBlood-Brain BarrierPericytesSmad3 ProteinVascular Endothelial Growth Factor AZebrafishAgedAged, 80 and overAnimalsBrainDisease Models, AnimalFemaleHumansInduced Pluripotent Stem CellsMaleSmad3 ProteinSMAD3 protein, humanVascular Endothelial Growth Factor AVEGFA protein, human

Identifiers

PMID38902234
PMCPMC11190273

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.