Evidence map›Paper›PMID 38900185›Full record

ArticleJournal of the American Medical Informatics Association : JAMIA2024

Zero-shot learning to extract assessment criteria and medical services from the preventive healthcare guidelines using large language models.

Xiao Luo, Fattah Muhammad Tahabi, Tressica Marc, Laura Ann Haunert, Susan Storey

Abstract read
In one paragraph

Article in Journal of the American Medical Informatics Association : JAMIA, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Review
  3. Article
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  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Xiao LuoDepartment of Management Science and Information Systems, Spears School of Business, Oklahoma State University, Stillwater, OK 74078, United States.ORCID 0000-0002-3649-9785
Fattah Muhammad TahabiDepartment of Management Science and Information Systems, Spears School of Business, Oklahoma State University, Stillwater, OK 74078, United States.
Tressica MarcDepartment of Computer Information Technology, Purdue School of Engineering and Technology, Indiana University-Purdue University Indianapolis, Indianapolis, IN 46202, United States.
Laura Ann HaunertSchool of Nursing, Indiana University, Indianapolis, IN 46202, United States.
Susan StoreySchool of Nursing, Indiana University, Indianapolis, IN 46202, United States.ORCID 0000-0003-0701-7465

Funding

A personalized preventive care recommendation system by integrating guidelines with the EHR dataR15GM139094 · NIGMS · OKLAHOMA STATE UNIVERSITY STILLWATER · PI LUO, XIAO · 2021 to 2021
$447k
NIGMS NIH HHS R15 GM139094NIGMS NIH HHS R15GM139094
6 · The paper itself

Abstract

objectivesThe integration of these preventive guidelines with Electronic Health Records (EHRs) systems, coupled with the generation of personalized preventive care recommendations, holds significant potential for improving healthcare outcomes. Our study investigates the feasibility of using Large Language Models (LLMs) to automate the assessment criteria and risk factors from the guidelines for future analysis against medical records in EHR. MATERIALS AND

methodsWe annotated the criteria, risk factors, and preventive medical services described in the adult guidelines published by United States Preventive Services Taskforce and evaluated 3 state-of-the-art LLMs on extracting information in these categories from the guidelines automatically.

resultsWe included 24 guidelines in this study. The LLMs can automate the extraction of all criteria, risk factors, and medical services from 9 guidelines. All 3 LLMs perform well on extracting information regarding the demographic criteria or risk factors. Some LLMs perform better on extracting the social determinants of health, family history, and preventive counseling services than the others. DISCUSSION: While LLMs demonstrate the capability to handle lengthy preventive care guidelines, several challenges persist, including constraints related to the maximum length of input tokens and the tendency to generate content rather than adhering strictly to the original input. Moreover, the utilization of LLMs in real-world clinical settings necessitates careful ethical consideration. It is imperative that healthcare professionals meticulously validate the extracted information to mitigate biases, ensure completeness, and maintain accuracy.

conclusionWe developed a data structure to store the annotated preventive guidelines and make it publicly available. Employing state-of-the-art LLMs to extract preventive care criteria, risk factors, and preventive care services paves the way for the future integration of these guidelines into the EHR.

Indexed as

Electronic Health RecordsPractice Guidelines as TopicPreventive Health ServicesHumansMachine LearningNatural Language ProcessingRisk Factorsclinical guidelinesinformation extractionlarge language modelspreventive care

Identifiers

PMID38900185
PMCPMC11258407

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.