Evidence map›Paper›PMID 38898415›Full record

ArticleBMC plant biology2024

Soil fungal community structure and function response to rhizoma perennial peanut cultivars.

Umar Daraz, Adesuwa S Erhunmwunse, José C B Dubeux, Cheryl Mackowiak, Hui-Ling Liao, Xiao-Bo Wang

Abstract read
In one paragraph

Article in BMC plant biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Umar DarazState Key Laboratory of Herbage Improvement and Grassland Agro-Ecosystems, College of Pastoral, Agriculture Science and Technology, Center for Grassland Microbiome, Lanzhou University, Lanzhou, China.
Adesuwa S ErhunmwunseNorth Florida Research and Education Center, University of Florida, Quincy, FL, USA.
José C B DubeuxNorth Florida Research and Education Center, University of Florida, Marianna, FL, USA.
Cheryl MackowiakNorth Florida Research and Education Center, University of Florida, Quincy, FL, USA.
Hui-Ling LiaoNorth Florida Research and Education Center, University of Florida, Quincy, FL, USA.
Xiao-Bo WangState Key Laboratory of Herbage Improvement and Grassland Agro-Ecosystems, College of Pastoral, Agriculture Science and Technology, Center for Grassland Microbiome, Lanzhou University, Lanzhou, China. wangxiaobo@lzu.edu.cn.

Funding

Agriculture; the Soil, Water, and Ecosystem Sciences Graduate School Matching Funding to Adesuwa Erhunmwunse; the National Institute of Food and Agriculture; U.S. Department of Agriculture 2021-38640-34724National Key Research and Development Program of China 2021YFD1300504National Natural Science Foundation of China 32271716Starting Research Fund for the Introduction of Talent of Lanzhou University 561120205the Key Projects of the Natural Science of Foundation of Gansu Province 23JRRA1023USDA National Institute of Food and Agriculture 2019-67013-29107
6 · The paper itself

Abstract

backgroundCrop-associated microorganisms play a crucial role in soil nutrient cycling, and crop growth, and health. Fine-scale patterns in soil microbial community diversity and composition are commonly regulated by plant species or genotype. Despite extensive reports in different crop or its cultivar effects on the microbial community, it is uncertain how rhizoma peanut (RP, Arachis glabrata Benth.), a perennial warm-season legume forage that is well-adapted in the southern USA, affects soil microbial community across different cultivars.

resultsThis study explored the influence of seven different RP cultivars on the taxonomic composition, diversity, and functional groups of soil fungal communities through a field trial in Marianna, Florida, Southern USA, using next-generation sequencing technique. Our results showed that the taxonomic diversity and composition of the fungal community differed significantly across RP cultivars. Alpha diversity (Shannon, Simpson, and Pielou's evenness) was significantly higher in Ecoturf but lower in UF_Peace and Florigraze compared to other cultivars (p < 0.001). Phylogenetic diversity (Faith's PD) was lowest in Latitude compared to other cultivars (p < 0.0001). The dominant phyla were Ascomycota (13.34%), Mortierellomycota (3.82%), and Basidiomycota (2.99%), which were significantly greater in Florigraze, UF_Peace, and Ecoturf, respectively. The relative abundance of Neocosmospora was markedly high (21.45%) in UF_Tito and showed large variations across cultivars. The relative abundance of the dominant genera was significantly greater in Arbrook than in other cultivars. There were also significant differences in the co-occurrence network, showing different keystone taxa and more positive correlations than the negative correlations across cultivars. FUNGuild analysis showed that the relative abundance of functional guilds including pathogenic, saprotrophic, endophytic, mycorrhizal and parasitic fungi significantly differed among cultivars. Ecoturf had the greatest relative abundance of mycorrhizal fungal group (5.10 ± 0.44), whereas UF_Peace had the greatest relative abundance of endophytic (4.52 ± 0.56) and parasitic fungi (1.67 ± 0.30) compared to other cultivars.

conclusionsOur findings provide evidence of crop cultivar's effect in shaping fine-scale fungal community patterns in legume-based forage systems.

Indexed as

ArachisSoil MicrobiologyFloridaFungiMycobiomePhylogenyRhizomeGrassland ecosystemLegumesMicrobial diversityPlant-microorganism interactionsSoil fungi

Identifiers

PMID38898415
PMCPMC11186081

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.