Evidence map›Paper›PMID 38898234›Full record

ArticleEMBO molecular medicine2024

Mutation analysis in individual circulating tumor cells depicts intratumor heterogeneity in melanoma.

Mark Sementsov, Leonie Ott, Julian Kött, Alexander Sartori, Amelie Lusque, Sarah Degenhardt, Bertille Segier, Isabel Heidrich, Beate Volkmer, Rüdiger Greinert and 18 more

Abstract read
In one paragraph

Article in EMBO molecular medicine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Circulating Tumor DNA as a Biomarker for Melanoma Prognosis and Therapy.American journal of clinical dermatology · 2026
    Review
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  8. [Biomarkers in adjuvant and neoadjuvant treatment of melanoma].Dermatologie (Heidelberg, Germany) · 2025
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

28 authors.

Mark SementsovDepartment of Tumor Biology, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.ORCID http://orcid.org/0009-0006-8591-2237
Leonie OttDepartment of Tumor Biology, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.ORCID http://orcid.org/0000-0002-6308-0242
Julian KöttFleur Hiege Center for Skin Cancer Research, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.ORCID http://orcid.org/0000-0003-2073-3909
Alexander SartoriAgena Bioscience GmbH, Hamburg, Germany.ORCID http://orcid.org/0009-0001-7741-7555
Amelie LusqueBiostatistics & Health Data Science Unit, Institut Claudius-Regaud, IUCT-Oncopole, Toulouse, France.
Sarah DegenhardtDepartment of Molecular Cell Biology, Skin Cancer Center Buxtehude, Elbe Kliniken Buxtehude, Buxtehude, Germany.ORCID http://orcid.org/0000-0002-0626-8281
Bertille SegierBiostatistics & Health Data Science Unit, Institut Claudius-Regaud, IUCT-Oncopole, Toulouse, France.ORCID http://orcid.org/0009-0005-3492-3780
Isabel HeidrichFleur Hiege Center for Skin Cancer Research, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.
Beate VolkmerDepartment of Molecular Cell Biology, Skin Cancer Center Buxtehude, Elbe Kliniken Buxtehude, Buxtehude, Germany.ORCID http://orcid.org/0000-0001-9218-8650
Rüdiger GreinertDepartment of Molecular Cell Biology, Skin Cancer Center Buxtehude, Elbe Kliniken Buxtehude, Buxtehude, Germany.
Peter MohrDepartment of Dermatology, Elbe Kliniken Buxtehude, 21614, Buxtehude, Germany.
Ronald SimonInstitute of Pathology, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.
Julia-Christina StadlerFleur Hiege Center for Skin Cancer Research, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.
Darryl IrwinAgena Bioscience, Bowen Hills, QLD, Australia.ORCID http://orcid.org/0000-0003-4842-6708
Claudia KochDepartment of Tumor Biology, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.
Antje AndreasDepartment of Tumor Biology, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.
Benjamin DeitertDepartment of Tumor Biology, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.ORCID http://orcid.org/0000-0003-2794-0003
Verena ThewesDivision of Stem Cells and Cancer, German Cancer Research Center (DKFZ) and DKFZ-ZMBH Alliance, Heidelberg, Germany.
Andreas TrumppDivision of Stem Cells and Cancer, German Cancer Research Center (DKFZ) and DKFZ-ZMBH Alliance, Heidelberg, Germany.ORCID http://orcid.org/0000-0002-6212-3466
Andreas SchneeweissNational Center for Tumor Diseases, Heidelberg University Hospital and German Cancer Research Center, Heidelberg, Germany.
Yassine BelloumDepartment of Tumor Biology, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.
Sven PeineDepartment of Transfusion Medicine, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.
Harriett WikmanDepartment of Tumor Biology, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.ORCID http://orcid.org/0000-0001-6862-0888
Sabine RiethdorfDepartment of Tumor Biology, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.ORCID http://orcid.org/0000-0003-0028-5643
Stefan W SchneiderDepartment of Dermatology and Venereology, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.ORCID http://orcid.org/0000-0002-4679-7137
Christoffer Gebhardt *Fleur Hiege Center for Skin Cancer Research, University Medical Center Hamburg-Eppendorf, Hamburg, Germany. ch.gebhardt@uke.de.ORCID http://orcid.org/0000-0001-7090-9584
Klaus Pantel *Department of Tumor Biology, University Medical Center Hamburg-Eppendorf, Hamburg, Germany. pantel@uke.de.ORCID http://orcid.org/0000-0001-5736-2772
Laura Keller *Department of Tumor Biology, University Medical Center Hamburg-Eppendorf, Hamburg, Germany. keller.laura@iuct-oncopole.fr.ORCID http://orcid.org/0000-0002-1786-9760

Funding

Bundesministerium für Bildung und Forschung (BMBF) 031B0843DDeutsche Krebshilfe (German Cancer Aid) 70114705EC | ERC | HORIZON EUROPE European Research Council (ERC) 834974Institut National de la Santé et de la Recherche Médicale (Inserm) Plan Cancer 2014-2019
6 · The paper itself

Abstract

Circulating tumor DNA (ctDNA) is the cornerstone of liquid biopsy diagnostics, revealing clinically relevant genomic aberrations from blood of cancer patients. Genomic analysis of single circulating tumor cells (CTCs) could provide additional insights into intra-patient heterogeneity, but it requires whole-genome amplification (WGA) of DNA, which might introduce bias. Here, we describe a novel approach based on mass spectrometry for mutation detection from individual CTCs not requiring WGA and complex bioinformatics pipelines. After establishment of our protocol on tumor cell line-derived single cells, it was validated on CTCs of 33 metastatic melanoma patients and the mutations were compared to those obtained from tumor tissue and ctDNA. Although concordance with tumor tissue was superior for ctDNA over CTC analysis, a larger number of mutations were found within CTCs compared to ctDNA (p = 0.039), including mutations in melanoma driver genes, or those associated with resistance to therapy or metastasis. Thus, our results demonstrate proof-of-principle data that CTC analysis can provide clinically relevant genomic information that is not redundant to tumor tissue or ctDNA analysis.

Indexed as

Circulating Tumor DNAMelanomaMutationNeoplastic Cells, CirculatingCell Line, TumorDNA Mutational AnalysisFemaleGenetic HeterogeneityHumansMaleMass SpectrometryCirculating Tumor DNACirculating Tumor CellsHeterogeneityMelanomaTumor

Identifiers

PMID38898234
PMCPMC11250829

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.