Evidence map›Paper›PMID 38898157›Full record

ArticleNature immunology2024

Stem-like T cells are associated with the pathogenesis of ulcerative colitis in humans.

Yingcong Li, Ciro Ramírez-Suástegui, Richard Harris, Francisco Emmanuel Castañeda-Castro, Gabriel Ascui, Tamara Pérez-Jeldres, Alejandro Diaz, Carla Morong, Daniel A Giles, Jiani Chai and 5 more

Abstract read
In one paragraph

Article in Nature immunology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

  1. Article
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  6. Article
  7. Article
  8. Review
  9. TGF-β signaling mediates crosstalk between CD8Journal of biomedical science · 2026
    Article
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  12. Review
  13. Review
  14. Review
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  16. Article
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  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Yingcong Li *La Jolla Institute for Immunology, La Jolla, CA, USA.ORCID http://orcid.org/0000-0002-0746-0531
Ciro Ramírez-Suástegui *La Jolla Institute for Immunology, La Jolla, CA, USA.
Richard Harris *School of Clinical and Experimental Sciences, Faculty of Medicine, University of Southampton, Southampton, UK.ORCID http://orcid.org/0000-0002-1658-2979
Francisco Emmanuel Castañeda-CastroLa Jolla Institute for Immunology, La Jolla, CA, USA.
Gabriel AscuiLa Jolla Institute for Immunology, La Jolla, CA, USA.ORCID http://orcid.org/0000-0001-6837-3194
Tamara Pérez-JeldresDepartment of Gastroenterology, School of Medicine, Pontificia Universidad Católica de Chile, Santiago, Chile.
Alejandro DiazDepartment of Gastroenterology, Hospital San Borja Arriarán, Santiago, Chile.
Carla MorongDepartment of Gastroenterology, Hospital San Borja Arriarán, Santiago, Chile.
Daniel A GilesLa Jolla Institute for Immunology, La Jolla, CA, USA.
Jiani ChaiLa Jolla Institute for Immunology, La Jolla, CA, USA.
Gregory SeumoisLa Jolla Institute for Immunology, La Jolla, CA, USA.ORCID http://orcid.org/0000-0002-8164-6852
Tilman Sanchez-ElsnerDepartment of Gastroenterology, University Hospital Southampton NHS FT, Southampton, UK.
Fraser CummingsSchool of Clinical and Experimental Sciences, Faculty of Medicine, University of Southampton, Southampton, UK.
Mitchell KronenbergLa Jolla Institute for Immunology, La Jolla, CA, USA. mitch@lji.org.ORCID http://orcid.org/0000-0001-6318-6445
Pandurangan VijayanandLa Jolla Institute for Immunology, La Jolla, CA, USA. vijay@lji.org.ORCID http://orcid.org/0000-0001-7067-9723

Funding

Using polygenic scores to enhance both variant discovery, and understanding of functional consequences of genetic variation in IBD.P01DK046763 · NIDDK · CEDARS-SINAI MEDICAL CENTER · PI MCGOVERN, DERMOT PATRICK · 1992 to 2020
$31.1M
NovaSeq5000 High Throughput SequencerS10OD025052 · OD · LA JOLLA INSTITUTE FOR IMMUNOLOGY · PI SEUMOIS, GREGORY · 2018 to 2018
$832k
Super-resolution confocal microscopeS10OD021831 · OD · LA JOLLA INSTITUTE FOR IMMUNOLOGY · PI LEY, KLAUS F. · 2017 to 2017
$566k
FACSAria II Cell SorterS10RR027366 · NCRR · LA JOLLA INSTITUTE FOR IMMUNOLOGY · PI CROFT, MICHAEL · 2011 to 2011
$514k
The role of GPR183 in Inflammatory Bowel Disease pathogenesisF32AI140581 · NIAID · LA JOLLA INSTITUTE FOR IMMUNOLOGY · PI GILES, DANIEL AARON · 2018 to 2019
$89k
NCRR NIH HHS S10 RR027366NIAID NIH HHS F32 AI140581NIDDK NIH HHS P01 DK046763NIH HHS S10 OD021831NIH HHS S10 OD025052U.S. Department of Health & Human Services | NIH | National Institute of Diabetes and Digestive and Kidney Diseases (National Institute of Diabetes & Digestive & Kidney Diseases) DK46763
6 · The paper itself

Abstract

To understand the role of T cells in the pathogenesis of ulcerative colitis (UC), we analyzed colonic T cells isolated from patients with UC and controls. Here we identified colonic CD4

Indexed as

Colitis, UlcerativeHepatocyte Nuclear Factor 1-alphaAdoptive TransferAdultAnimalsCD4-Positive T-LymphocytesCD8-Positive T-LymphocytesColonDisease Models, AnimalFemaleHumansMaleMiceMice, Inbred C57BLMice, KnockoutMiddle AgedHepatocyte Nuclear Factor 1-alphaHnf1a protein, mouseProto-Oncogene Proteins c-bcl-6

Identifiers

PMID38898157
PMCPMC11800318

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.