Evidence map›Paper›PMID 38898066›Full record

ArticleScientific reports2024

Addressing data limitations in seizure prediction through transfer learning.

Fábio Lopes, Mauro F Pinto, António Dourado, Andreas Schulze-Bonhage, Matthias Dümpelmann, César Teixeira

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Fábio LopesDepartment of Informatics Engineering, Center for Informatics and Systems of the University of Coimbra, University of Coimbra, Coimbra, Portugal. fadcl@dei.uc.pt.
Mauro F PintoDepartment of Informatics Engineering, Center for Informatics and Systems of the University of Coimbra, University of Coimbra, Coimbra, Portugal.
António DouradoDepartment of Informatics Engineering, Center for Informatics and Systems of the University of Coimbra, University of Coimbra, Coimbra, Portugal.
Andreas Schulze-BonhageDepartment Neurosurgery, Epilepsy Center, Medical Center - University of Freiburg, Faculty of Medicine, University of Freiburg, Freiburg, Germany.
Matthias DümpelmannDepartment Neurosurgery, Epilepsy Center, Medical Center - University of Freiburg, Faculty of Medicine, University of Freiburg, Freiburg, Germany.
César TeixeiraDepartment of Informatics Engineering, Center for Informatics and Systems of the University of Coimbra, University of Coimbra, Coimbra, Portugal.

Funding

Fundação para a Ciência e a Tecnologia CISUC - UID/CEC/00326/2020
6 · The paper itself

Abstract

According to the literature, seizure prediction models should be developed following a patient-specific approach. However, seizures are usually very rare events, meaning the number of events that may be used to optimise seizure prediction approaches is limited. To overcome such constraint, we analysed the possibility of using data from patients from an external database to improve patient-specific seizure prediction models. We present seizure prediction models trained using a transfer learning procedure. We trained a deep convolutional autoencoder using electroencephalogram data from 41 patients collected from the EPILEPSIAE database. Then, a bidirectional long short-term memory and a classifier layers were added on the top of the encoder part and were optimised for 24 patients from the Universitätsklinikum Freiburg individually. The encoder was used as a feature extraction module. Therefore, its weights were not changed during the patient-specific training. Experimental results showed that seizure prediction models optimised using pretrained weights present about four times fewer false alarms while maintaining the same ability to predict seizures and achieved more 13% validated patients. Therefore, results evidenced that the optimisation using transfer learning was more stable and faster, saving computational resources. In summary, adopting transfer learning for seizure prediction models represents a significant advancement. It addresses the data limitation seen in the seizure prediction field and offers more efficient and stable training, conserving computational resources. Additionally, despite the compact size, transfer learning allows to easily share data knowledge due to fewer ethical restrictions and lower storage requirements. The convolutional autoencoder developed in this study will be shared with the scientific community, promoting further research.

Indexed as

ElectroencephalographySeizuresAdultDatabases, FactualFemaleHumansMachine LearningMaleNeural Networks, Computer

Identifiers

PMID38898066
PMCPMC11187122

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.