Evidence map›Paper›PMID 38897734›Full record

ArticleGigaScience2024

A 3D printed plant model for accurate and reliable 3D plant phenotyping.

Jonas Bömer, Felix Esser, Elias Marks, Radu Alexandru Rosu, Sven Behnke, Lasse Klingbeil, Heiner Kuhlmann, Cyrill Stachniss, Anne-Katrin Mahlein, Stefan Paulus

Abstract read
In one paragraph

Article in GigaScience, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Jonas BömerInstitute of Sugar Beet Research (IfZ), Göttingen 37079, Germany.ORCID 0000-0003-0723-4224
Felix EsserInstitute for Geodesy and Geoinformation (IGG), University of Bonn, Bonn 53115, Germany.ORCID 0000-0003-3119-8585
Elias MarksInstitute for Geodesy and Geoinformation (IGG), University of Bonn, Bonn 53115, Germany.ORCID 0000-0003-1322-9317
Radu Alexandru RosuInstitute for Computer Science VI-Autonomous Intelligent Systems (AIS), University of Bonn, Bonn 53115, Germany.ORCID 0000-0001-7349-4126
Sven BehnkeCenter for Robotics, University of Bonn, Bonn 53115, Germany.ORCID 0000-0002-5040-7525
Lasse KlingbeilInstitute for Geodesy and Geoinformation (IGG), University of Bonn, Bonn 53115, Germany.ORCID 0000-0002-1941-150X
Heiner KuhlmannInstitute for Geodesy and Geoinformation (IGG), University of Bonn, Bonn 53115, Germany.ORCID 0009-0004-9758-7721
Cyrill StachnissInstitute for Geodesy and Geoinformation (IGG), University of Bonn, Bonn 53115, Germany.ORCID 0000-0003-1173-6972
Anne-Katrin MahleinInstitute of Sugar Beet Research (IfZ), Göttingen 37079, Germany.ORCID 0000-0003-1091-3690
Stefan PaulusInstitute of Sugar Beet Research (IfZ), Göttingen 37079, Germany.ORCID 0000-0003-4402-4760

Funding

Deutsche ForschungsgemeinschaftFederal Ministry of Food and Agriculture 28DK108C20
6 · The paper itself

Abstract

backgroundThis study addresses the importance of precise referencing in 3-dimensional (3D) plant phenotyping, which is crucial for advancing plant breeding and improving crop production. Traditionally, reference data in plant phenotyping rely on invasive methods. Recent advancements in 3D sensing technologies offer the possibility to collect parameters that cannot be referenced by manual measurements. This work focuses on evaluating a 3D printed sugar beet plant model as a referencing tool.

resultsFused deposition modeling has turned out to be a suitable 3D printing technique for creating reference objects in 3D plant phenotyping. Production deviations of the created reference model were in a low and acceptable range. We were able to achieve deviations ranging from -10 mm to +5 mm. In parallel, we demonstrated a high-dimensional stability of the reference model, reaching only ±4 mm deformation over the course of 1 year. Detailed print files, assembly descriptions, and benchmark parameters are provided, facilitating replication and benefiting the research community.

conclusionConsumer-grade 3D printing was utilized to create a stable and reproducible 3D reference model of a sugar beet plant, addressing challenges in referencing morphological parameters in 3D plant phenotyping. The reference model is applicable in 3 demonstrated use cases: evaluating and comparing 3D sensor systems, investigating the potential accuracy of parameter extraction algorithms, and continuously monitoring these algorithms in practical experiments in greenhouse and field experiments. Using this approach, it is possible to monitor the extraction of a nonverifiable parameter and create reference data. The process serves as a model for developing reference models for other agricultural crops.

Indexed as

Beta vulgarisPhenotypePrinting, Three-DimensionalPlant Breeding3D plant phenotyping3D printingreference

Identifiers

PMID38897734
PMCPMC11186670

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.