Evidence map›Paper›PMID 38895411›Full record

ArticlebioRxiv : the preprint server for biology2024

Systems genomics of salinity stress response in rice.

Sonal Gupta, Simon C Groen, Maricris L Zaidem, Andres Godwin C Sajise, Irina Calic, Mignon A Natividad, Kenneth L McNally, Georgina V Vergara, Rahul Satija, Steven J Franks and 3 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors.

Sonal GuptaCenter for Genomics and Systems Biology, New York University, New York, NY USA.
Simon C GroenCenter for Genomics and Systems Biology, New York University, New York, NY USA.ORCID 0000-0003-4538-8865
Maricris L ZaidemCenter for Genomics and Systems Biology, New York University, New York, NY USA.
Andres Godwin C SajiseInternational Rice Research Institute, Los Baños, Philippines.
Irina CalicDepartment of Biological Sciences, Fordham University, Bronx, NY USA.
Mignon A NatividadInternational Rice Research Institute, Los Baños, Philippines.
Kenneth L McNallyInternational Rice Research Institute, Los Baños, Philippines.
Georgina V VergaraInternational Rice Research Institute, Los Baños, Philippines.
Rahul SatijaCenter for Genomics and Systems Biology, New York University, New York, NY USA.
Steven J FranksDepartment of Biological Sciences, Fordham University, Bronx, NY USA.
Rakesh K SinghInternational Rice Research Institute, Los Baños, Philippines.
Zoé Joly-LopezCenter for Genomics and Systems Biology, New York University, New York, NY USA.ORCID 0000-0002-7926-322X
Michael D PuruggananCenter for Genomics and Systems Biology, New York University, New York, NY USA.ORCID 0000-0002-4419-2345

Funding

Evolutionary Systems Biology of Host-Parasite InteractionsR35GM151194 · NIGMS · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI Simon Cornelis Groen · 2023 to 2026
$1.5M
NIGMS NIH HHS R35 GM151194
6 · The paper itself

Abstract

Populations can adapt to stressful environments through changes in gene expression. However, the fitness effect of gene expression in mediating stress response and adaptation remains largely unexplored. Here, we use an integrative field dataset obtained from 780 plants of

Indexed as

decoherencedisruptive selectioneQTLlinear selectionphenotypic selectionstabilizing selection

Identifiers

PMID38895411
PMCPMC11185513

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.