Evidence map›Paper›PMID 38895235›Full record

ArticlebioRxiv : the preprint server for biology2024

Homologous Recombination Shapes the Architecture and Evolution of Bacterial Genomes.

Ellis L Torrance, Awa Diop, Louis-Marie Bobay

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

3 authors.

Ellis L TorranceDept. of Biology, University of North Carolina Greensboro, Greensboro, NC 27412.
Awa DiopDept. of Biological Sciences, North Carolina State University, Raleigh, NC 27695.
Louis-Marie BobayDept. of Biology, University of North Carolina Greensboro, Greensboro, NC 27412.ORCID 0000-0002-0438-545X

Funding

Investigating the Impact and Patterns of Homologous Recombination and Adaptive Evolution on Bacterial GenomesR01GM132137 · NIGMS · UNIVERSITY OF NORTH CAROLINA GREENSBORO · PI BOBAY, LOUIS-MARIE · 2020 to 2024
$1.5M
NIGMS NIH HHS R01 GM132137
6 · The paper itself

Abstract

Homologous recombination is a key evolutionary force that varies considerably across bacterial species. However, how the landscape of homologous recombination varies across genes and within individual genomes has only been studied in a few species. Here, we used Approximate Bayesian Computation to estimate the recombination rate along the genomes of 145 bacterial species. Our results show that homologous recombination varies greatly along bacterial genomes and shapes many aspects of genome architecture and evolution. The genomic landscape of recombination presents several key signatures: rates are highest near the origin of replication in most species, patterns of recombination generally appear symmetrical in both replichores (

Identifiers

PMID38895235
PMCPMC11185547

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.