Evidence map›Paper›PMID 38893146›Full record

ArticleCancers2024

Integrating Spatial and Morphological Characteristics into Melanoma Prognosis: A Computational Approach.

Chang Bian, Garry Ashton, Megan Grant, Valeria Pavet Rodriguez, Isabel Peset Martin, Anna Maria Tsakiroglou, Martin Cook, Martin Fergie

Abstract read
In one paragraph

Article in Cancers, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Chang BianThe Division of Informatics, Imaging and Data Science, Faculty of Biology, Medicine and Health, The University of Manchester, Manchester M13 9PT, UK.ORCID 0000-0002-6721-6944
Garry AshtonCancer Research UK Manchester Institute, The University of Manchester, Manchester M20 4BX, UK.
Megan GrantCancer Research UK Manchester Institute, The University of Manchester, Manchester M20 4BX, UK.
Valeria Pavet RodriguezCancer Research UK Manchester Institute, The University of Manchester, Manchester M20 4BX, UK.
Isabel Peset MartinCancer Research UK Manchester Institute, The University of Manchester, Manchester M20 4BX, UK.
Anna Maria TsakiroglouThe Division of Informatics, Imaging and Data Science, Faculty of Biology, Medicine and Health, The University of Manchester, Manchester M13 9PT, UK.
Martin CookCancer Research UK Manchester Institute, The University of Manchester, Manchester M20 4BX, UK.
Martin FergieThe Division of Informatics, Imaging and Data Science, Faculty of Biology, Medicine and Health, The University of Manchester, Manchester M13 9PT, UK.ORCID 0000-0002-9531-6109

Funding

CRUK Manchester Institute A27412
6 · The paper itself

Abstract

In this study, the prognostic value of cellular morphology and spatial configurations in melanoma has been examined, aiming to complement traditional prognostic indicators like mitotic activity and tumor thickness. Through a computational pipeline using machine learning and deep learning methods, we quantified nuclei sizes within different spatial regions and analyzed their prognostic significance using univariate and multivariate Cox models. Nuclei sizes in the invasive band demonstrated a significant hazard ratio (HR) of 1.1 (95% CI: 1.03, 1.18). Similarly, the nuclei sizes of tumor cells and Ki67 S100 co-positive cells in the invasive band achieved HRs of 1.07 (95% CI: 1.02, 1.13) and 1.09 (95% CI: 1.04, 1.16), respectively. Our findings reveal that nuclei sizes, particularly in the invasive band, are potentially prognostic factors. Correlation analyses further demonstrated a meaningful relationship between cellular morphology and tumor progression, notably showing that nuclei size within the invasive band correlates substantially with tumor thickness. These results suggest the potential of integrating spatial and morphological analyses into melanoma prognostication.

Indexed as

cellular morphologycomputational pipelinedeep learningmachine learningmelanoma prognosticationspatial analysis

Identifiers

PMID38893146
PMCPMC11171264

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.