Evidence map›Paper›PMID 38891588›Full record

ArticleAnimals : an open access journal from MDPI2024

A Standardized Nomenclature Design for Systematic Referencing and Identification of Animal Cellular Material.

Lisa Schrade, Nancy Mah, Anita Bandrowski, Ying Chen, Johannes Dewender, Sebastian Diecke, Christian Hiepen, Madeline A Lancaster, Tomas Marques-Bonet, Sira Martinez and 9 more

Abstract read
In one paragraph

Article in Animals : an open access journal from MDPI, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Lisa SchradeFraunhofer Institute for Biomedical Engineering (IBMT), 66280 Sulzbach, Germany.ORCID 0009-0005-7249-1640
Nancy MahFraunhofer Institute for Biomedical Engineering (IBMT), 66280 Sulzbach, Germany.ORCID 0000-0002-1240-8076
Anita BandrowskiDepartment of Neuroscience, FAIR Data Informatics Lab, University of California San Diego, San Diego, CA 92093, USA.ORCID 0000-0002-5497-0243
Ying ChenFraunhofer Institute for Biomedical Engineering (IBMT), 66280 Sulzbach, Germany.ORCID 0000-0001-5770-6133
Johannes DewenderFraunhofer Institute for Biomedical Engineering (IBMT), 66280 Sulzbach, Germany.ORCID 0000-0002-8711-6203
Sebastian DieckeTechnology Platform Pluripotent Stem Cells, Max Delbrück Center for Molecular Medicine in the Helmholtz Association (MDC), 13125 Berlin, Germany.ORCID 0000-0002-5219-5992
Christian HiepenFraunhofer Institute for Biomedical Engineering (IBMT), 66280 Sulzbach, Germany.ORCID 0000-0001-7345-6496
Madeline A LancasterMRC Laboratory of Molecular Biology, Cambridge Biomedical Campus, Cambridge CB2 0QH, UK.ORCID 0000-0003-2324-8853
Tomas Marques-BonetInstitute of Evolutionary Biology, Pompeu Fabra University-Spanish National Research Council, ICREA, 08003 Barcelona, Spain.ORCID 0000-0002-5597-3075
Sira MartinezInstitute of Evolutionary Biology, Pompeu Fabra University-Spanish National Research Council, ICREA, 08003 Barcelona, Spain.ORCID 0000-0002-6642-4514
Sabine C MuellerFraunhofer Institute for Biomedical Engineering (IBMT), 66280 Sulzbach, Germany.ORCID 0000-0001-5184-1254
Christopher NavaraSan Antonio Cellular Therapeutics Institute, University of Texas at San Antonio, San Antonio, TX 78249, USA.ORCID 0000-0001-5915-0327
Alessandro PrigioneDepartment of General Pediatrics, Neonatology and Pediatric Cardiology, Duesseldorf University Hospital, Medical Faculty, Heinrich Heine University, 40225 Duesseldorf, Germany.ORCID 0000-0001-9457-1952
Stefanie SeltmannFraunhofer Institute for Biomedical Engineering (IBMT), 66280 Sulzbach, Germany.ORCID 0000-0002-8411-3226
Jaroslaw SochackiEuropean Molecular Biology Laboratory (EMBL) Barcelona, 08003 Barcelona, Spain.ORCID 0000-0002-4599-9490
Magdalena A SutcliffeMRC Laboratory of Molecular Biology, Cambridge Biomedical Campus, Cambridge CB2 0QH, UK.ORCID 0000-0001-5853-2331
Vera ZywitzaTechnology Platform Pluripotent Stem Cells, Max Delbrück Center for Molecular Medicine in the Helmholtz Association (MDC), 13125 Berlin, Germany.ORCID 0000-0003-3055-8569
Thomas B HildebrandtDepartment of Reproduction Management, Leibniz Institute for Zoo and Wildlife Research (IZW), 10315 Berlin, Germany.ORCID 0000-0001-8685-4733
Andreas KurtzFraunhofer Institute for Biomedical Engineering (IBMT), 66280 Sulzbach, Germany.ORCID 0000-0003-3301-6546

Funding

Spatial analyses of marmoset germline developmentU01DA054170 · NIDA · UNIVERSITY OF TEXAS SAN ANTONIO · PI HERMANN, BRIAN PETER, HSIEH, JENNY · 2021 to 2025
$12.1M
From RRID to Resource Watch: A Knowledgebase of Biomedical Research ResourcesR24GM144308 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Anita ELZBIETA Bandrowski, Jeffrey S. Grethe · 2022 to 2026
$2.9M
Deutsche Forschungsgemeinschaft PR1527/5-1Deutsche Forschungsgemeinschaft PR1527/6-1European Commission 101074135European Commission 101080249Federal Ministry of Education and Research 01GM2002AFederal Ministry of Education and Research 16LW0187KMedical Research Council MC_UP_1201/9NIDA NIH HHS U01 DA054170NIGMS NIH HHS R24 GM144308
6 · The paper itself

Abstract

The documentation, preservation and rescue of biological diversity increasingly uses living biological samples. Persistent associations between species, biosamples, such as tissues and cell lines, and the accompanying data are indispensable for using, exchanging and benefiting from these valuable materials. Explicit authentication of such biosamples by assigning unique and robust identifiers is therefore required to allow for unambiguous referencing, avoid identification conflicts and maintain reproducibility in research. A predefined nomenclature based on uniform rules would facilitate this process. However, such a nomenclature is currently lacking for animal biological material. We here present a first, standardized, human-readable nomenclature design, which is sufficient to generate unique and stable identifying names for animal cellular material with a focus on wildlife species. A species-specific human- and machine-readable syntax is included in the proposed standard naming scheme, allowing for the traceability of donated material and cultured cells, as well as data FAIRification. Only when it is consistently applied in the public domain, as publications and inter-institutional samples and data are exchanged, distributed and stored centrally, can the risks of misidentification and loss of traceability be mitigated. This innovative globally applicable identification system provides a standard for a sustainable structure for the long-term storage of animal bio-samples in cryobanks and hence facilitates current as well as future species conservation and biomedical research.

Indexed as

biodiversitybiosample nomenclaturecryobankingFAIR dataspecies conservationstandardizationunambiguous identifierviable cell materialwildlife

Identifiers

PMID38891588
PMCPMC11171381

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.