Evidence map›Paper›PMID 38891019›Full record

ArticleCells2024

Analysis of MicroRNA Cargo in Circulating Extracellular Vesicles from HIV-Infected Individuals with Pulmonary Hypertension.

Aatish Mahajan, Sumedha Gunewardena, Alison Morris, Matthias Clauss, Navneet K Dhillon

Abstract read
In one paragraph

Article in Cells, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Aatish MahajanDivision of Pulmonary and Critical Care Medicine, Department of Medicine, University of Kansas Medical Center, Mail Stop 3007, 3901 Rainbow Blvd, Kansas City, KS 66160, USA.ORCID 0000-0002-5064-6921
Sumedha GunewardenaDepartment of Molecular & Integrative Physiology, University of Kansas Medical Center, Kansas City, KS 66160, USA.ORCID 0000-0003-2097-135X
Alison MorrisDepartment of Medicine, University of Pittsburgh School of Medicine, Pittsburgh, PA 15213, USA.
Matthias ClaussPulmonary, Critical Care, Sleep and Occupational Medicine, Indiana University School of Medicine, Indianapolis, IN 46202, USA.
Navneet K DhillonDivision of Pulmonary and Critical Care Medicine, Department of Medicine, University of Kansas Medical Center, Mail Stop 3007, 3901 Rainbow Blvd, Kansas City, KS 66160, USA.

Funding

Translational evaluation of aging, inflammation, and HIV in lung dysfunctionR01HL120398 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI MORRIS, ALISON · 2013 to 2017
$3.4M
Drug abuse and HIV-associated pulmonary vascular injuryR01HL152832 · NHLBI · UNIVERSITY OF KANSAS MEDICAL CENTER · PI DHILLON, NAVNEET KAUR · 2021 to 2024
$2.8M
Neural mechanisms of locomotion evoked by epidural stimulation of the spinal cordR01NS100928 · NINDS · GEORGIA INSTITUTE OF TECHNOLOGY · PI PRILUTSKY, BORIS I · 2017 to 2021
$2.7M
Potential Role of Extracellular Vesicles for the Development of HIV ComorbiditiesR01HL154859 · NHLBI · INDIANA UNIVERSITY INDIANAPOLIS · PI CLAUSS, MATTHIAS · 2020 to 2023
$2.5M
Extracellular Vesicles and and HIV/cocaine associated cardiopulmonary dysfunctionR01DA042715 · NIDA · UNIVERSITY OF KANSAS MEDICAL CENTER · PI DHILLON, NAVNEET KAUR · 2016 to 2020
$2.2M
Impact of Opiate abuse on HIV-mediated Pulmonary Vascular RemodelingR01HL129875 · NHLBI · UNIVERSITY OF KANSAS MEDICAL CENTER · PI DHILLON, NAVNEET KAUR · 2016 to 2018
$1.5M
National Heart Lung and Blood Institute R01HL120398National Heart Lung and Blood Institute R01HL129875National Heart Lung and Blood Institute R01HL152832National Heart Lung and Blood Institute R01HL154859NHLBI NIH HHS R01 HL152832NHLBI NIH HHS R01 HL154859NIDA NIH HHS R01 DA042715NIDA NIH HHS R01DA042715NINDS NIH HHS U24MH100931, U24MH100928, U24MH100929, U24MH100930, U24MH100925
6 · The paper itself

Abstract

The risk of developing pulmonary hypertension (PH) in people living with HIV is at least 300-fold higher than in the general population, and illicit drug use further potentiates the development of HIV-associated PH. The relevance of extracellular vesicles (EVs) containing both coding as well as non-coding RNAs in PH secondary to HIV infection and drug abuse is yet to be explored. We here compared the miRNA cargo of plasma-derived EVs from HIV-infected stimulant users with (HIV + Stimulants + PH) and without PH (HIV + Stimulants) using small RNA sequencing. The data were compared with 12 PH datasets available in the GEO database to identify potential candidate gene targets for differentially altered miRNAs using the following functional analysis tools: ingenuity pathway analysis (IPA), over-representation analysis (ORA), and gene set enrichment analysis (GSEA). MiRNAs involved in promoting cell proliferation and inhibition of intrinsic apoptotic signaling pathways were among the top upregulated miRNAs identified in EVs from the HIV + Stimulants + PH group compared to the HIV + Stimulants group. Alternatively, the downregulated miRNAs in the HIV + Stimulants + PH group suggested an association with the negative regulation of smooth muscle cell proliferation, IL-2 mediated signaling, and transmembrane receptor protein tyrosine kinase signaling pathways. The validation of significantly differentially expressed miRNAs in an independent set of HIV-infected (cocaine users and nondrug users) with and without PH confirmed the upregulation of miR-32-5p, 92-b-3p, and 301a-3p positively regulating cellular proliferation and downregulation of miR-5571, -4670 negatively regulating smooth muscle proliferation in EVs from HIV-PH patients. This increase in miR-301a-3p and decrease in miR-4670 were negatively correlated with the CD4 count and FEV1/FVC ratio, and positively correlated with viral load. Collectively, this data suggest the association of alterations in the miRNA cargo of circulating EVs with HIV-PH.

Indexed as

Extracellular VesiclesHIV InfectionsHypertension, PulmonaryMicroRNAsAdultCell ProliferationFemaleHumansMaleMiddle AgedMicroRNAscocaineextracellular RNApulmonary vascular diseasesubstance abuse

Identifiers

PMID38891019
PMCPMC11172129

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.