Evidence map›Paper›PMID 38890515›Full record

ArticleCommunications medicine2024

Sepsis endotypes identified by host gene expression across global cohorts.

Josh G Chenoweth, Joost Brandsma, Deborah A Striegel, Pavol Genzor, Elizabeth Chiyka, Paul W Blair, Subramaniam Krishnan, Elliot Dogbe, Isaac Boakye, Gary B Fogel and 10 more

Abstract read
In one paragraph

Article in Communications medicine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 1 synthesis or guideline pooled it.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors.

Josh G ChenowethAustere environments Consortium for Enhanced Sepsis Outcomes (ACESO), The Henry M. Jackson Foundation for the Advancement of Military Medicine, Inc., Bethesda, MD, USA. jchenoweth@aceso-sepsis.org.ORCID http://orcid.org/0009-0003-9693-5010
Joost BrandsmaAustere environments Consortium for Enhanced Sepsis Outcomes (ACESO), The Henry M. Jackson Foundation for the Advancement of Military Medicine, Inc., Bethesda, MD, USA.
Deborah A StriegelAustere environments Consortium for Enhanced Sepsis Outcomes (ACESO), The Henry M. Jackson Foundation for the Advancement of Military Medicine, Inc., Bethesda, MD, USA.
Pavol GenzorAustere environments Consortium for Enhanced Sepsis Outcomes (ACESO), The Henry M. Jackson Foundation for the Advancement of Military Medicine, Inc., Bethesda, MD, USA.ORCID http://orcid.org/0000-0002-3316-5659
Elizabeth ChiykaAustere environments Consortium for Enhanced Sepsis Outcomes (ACESO), The Henry M. Jackson Foundation for the Advancement of Military Medicine, Inc., Bethesda, MD, USA.
Paul W BlairAustere environments Consortium for Enhanced Sepsis Outcomes (ACESO), The Henry M. Jackson Foundation for the Advancement of Military Medicine, Inc., Bethesda, MD, USA.
Subramaniam KrishnanAustere environments Consortium for Enhanced Sepsis Outcomes (ACESO), The Henry M. Jackson Foundation for the Advancement of Military Medicine, Inc., Bethesda, MD, USA.
Elliot DogbeLaboratory Services Directorate, KATH, Kumasi, Ghana.
Isaac BoakyeResearch and Development Unit, KATH, Kumasi, Ghana.
Gary B FogelNatural Selection, Inc., San Diego, CA, USA.
Ephraim L TsalikCenter for Infectious Disease Diagnostics and Innovation, Department of Medicine, Duke University School of Medicine, Durham, NC, USA.ORCID http://orcid.org/0000-0002-6417-2042
Christopher W WoodsCenter for Infectious Disease Diagnostics and Innovation, Department of Medicine, Duke University School of Medicine, Durham, NC, USA.ORCID http://orcid.org/0000-0001-7240-2453
Alex Owusu-OforiLaboratory Services Directorate, KATH, Kumasi, Ghana.
Chris OppongAccident and Emergency Department, KATH, Kumasi, Ghana.
George OduroAccident and Emergency Department, KATH, Kumasi, Ghana.
Te VanthaTakeo Provincial Referral Hospital, Takeo, Cambodia.
Andrew G LetiziaNaval Medical Research Unit EURAFCENT Ghana detachment, Accra, Ghana.
Charmagne G BeckettNaval Medical Research Command Infectious Diseases Directorate, Silver Spring, MD, USA.
Kevin L SchullyAustere environments Consortium for Enhanced Sepsis Outcomes (ACESO), Biological Defense Research Directorate, Naval Medical Research Command-Frederick, Ft. Detrick, Maryland, MD, USA.
Danielle V ClarkAustere environments Consortium for Enhanced Sepsis Outcomes (ACESO), The Henry M. Jackson Foundation for the Advancement of Military Medicine, Inc., Bethesda, MD, USA.

Funding

United States Department of Defense | Defense Health Agency (DHA) FY1819 0130.1832United States Department of Defense | Defense Threat Reduction Agency (DTRA) HDTRA1516108
6 · The paper itself

Abstract

backgroundSepsis from infection is a global health priority and clinical trials have failed to deliver effective therapeutic interventions. To address complicating heterogeneity in sepsis pathobiology, and improve outcomes, promising precision medicine approaches are helping identify disease endotypes, however, they require a more complete definition of sepsis subgroups.

methodsHere, we use RNA sequencing from peripheral blood to interrogate the host response to sepsis from participants in a global observational study carried out in West Africa, Southeast Asia, and North America (N = 494).

resultsWe identify four sepsis subtypes differentiated by 28-day mortality. A low mortality immunocompetent group is specified by features that describe the adaptive immune system. In contrast, the three high mortality groups show elevated clinical severity consistent with multiple organ dysfunction. The immunosuppressed group members show signs of a dysfunctional immune response, the acute-inflammation group is set apart by molecular features of the innate immune response, while the immunometabolic group is characterized by metabolic pathways such as heme biosynthesis.

conclusionsOur analysis reveals details of molecular endotypes in sepsis that support immunotherapeutic interventions and identifies biomarkers that predict outcomes in these groups.

Identifiers

PMID38890515
PMCPMC11189468

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.