Evidence map›Paper›PMID 38889149›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2024

Denisovan admixture facilitated environmental adaptation in Papua New Guinean populations.

Danat Yermakovich, Mathilde André, Nicolas Brucato, Jason Kariwiga, Matthew Leavesley, Vasili Pankratov, Mayukh Mondal, François-Xavier Ricaut, Michael Dannemann

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Ancient DNA and Human Physiology.Physiology (Bethesda, Md.) · 2026
    Review
  2. Article
  3. Article
  4. Article
  5. Review
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  8. Article
  9. Denisovan admixture facilitated environmental adaptation in Papua New Guinean populations.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Danat YermakovichCenter of Genomics, Evolution and Medicine, Institute of Genomics, University of Tartu, Tartu 51010, Estonia.
Mathilde AndréCenter of Genomics, Evolution and Medicine, Institute of Genomics, University of Tartu, Tartu 51010, Estonia.ORCID 0000-0002-3279-0102
Nicolas BrucatoCentre de Recherche sur la Biodiversité et l'Environnement, Université de Toulouse, Centre National de la Recherche Scientifique, Institut de Recherche pour le Développement, Toulouse Institut National Polytechnique, Université Toulouse 3-Paul Sabatier, cedex 9, Toulouse 31062, France.
Jason KariwigaStrand of Anthropology, Sociology and Archaeology, School of Humanities and Social Sciences, University of Papua New Guinea, PO Box 320, University 134, National Capital District, Papua New Guinea.
Matthew LeavesleyStrand of Anthropology, Sociology and Archaeology, School of Humanities and Social Sciences, University of Papua New Guinea, PO Box 320, University 134, National Capital District, Papua New Guinea.ORCID 0000-0002-4612-8304
Vasili PankratovCenter of Genomics, Evolution and Medicine, Institute of Genomics, University of Tartu, Tartu 51010, Estonia.ORCID 0000-0001-7928-4402
Mayukh MondalCenter of Genomics, Evolution and Medicine, Institute of Genomics, University of Tartu, Tartu 51010, Estonia.
François-Xavier Ricaut *Centre de Recherche sur la Biodiversité et l'Environnement, Université de Toulouse, Centre National de la Recherche Scientifique, Institut de Recherche pour le Développement, Toulouse Institut National Polytechnique, Université Toulouse 3-Paul Sabatier, cedex 9, Toulouse 31062, France.ORCID 0000-0001-7609-7898
Michael Dannemann *Center of Genomics, Evolution and Medicine, Institute of Genomics, University of Tartu, Tartu 51010, Estonia.ORCID 0000-0002-7076-8731

Funding

Association Nationale de la Recherche et de la Technologie (ANRT) PAPUAEVOL 20-CE12-0003-01EC | European Regional Development Fund (ERDF) MOBEC008EC | Horizon Europe | WPSERA | HORIZON EUROPE Reforming and enhancing the European Research and Innovation system (REERIS) 810645French Ministry of Foreign and European Affairs NAHM | Estonian Research Competency Council (Research Competency Council) TK214Laboratoire d'Excellence TULIP (Labex TULIP) NALeakey Foundation (The Leakey Foundation) NA
6 · The paper itself

Abstract

Neandertals and Denisovans, having inhabited distinct regions in Eurasia and possibly Oceania for over 200,000 y, experienced ample time to adapt to diverse environmental challenges these regions presented. Among present-day human populations, Papua New Guineans (PNG) stand out as one of the few carrying substantial amounts of both Neandertal and Denisovan DNA, a result of past admixture events with these archaic human groups. This study investigates the distribution of introgressed Denisovan and Neandertal DNA within two distinct PNG populations, residing in the highlands of Mt Wilhelm and the lowlands of Daru Island. These locations exhibit unique environmental features, some of which may parallel the challenges that archaic humans once confronted and adapted to. Our results show that PNG highlanders carry higher levels of Denisovan DNA compared to PNG lowlanders. Among the Denisovan-like haplotypes with higher frequencies in highlander populations, those exhibiting the greatest frequency difference compared to lowlander populations also demonstrate more pronounced differences in population frequencies than frequency-matched nonarchaic variants. Two of the five most highly differentiated of those haplotypes reside in genomic areas linked to brain development genes. Conversely, Denisovan-like haplotypes more frequent in lowlanders overlap with genes associated with immune response processes. Our findings suggest that Denisovan DNA has provided genetic variation associated with brain biology and immune response to PNG genomes, some of which might have facilitated adaptive processes to environmental challenges.

Indexed as

HaplotypesNeanderthalsAdaptation, PhysiologicalAnimalsGenetics, PopulationHumansPapua New Guineaarchaic admixturehuman evolutionlocal adaptation

Identifiers

PMID38889149
PMCPMC11214076

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.